Job Description P45395 Confidence 99.90% Date Thu Jan 5 12:02:32 GMT 2012 Rank 16 Aligned Residues 170 % Identity 17% Template c2amlB_ PDB info PDB header:transferase Chain: B: PDB Molecule:sis domain protein; PDBTitle: crystal structure of lmo0035 protein (46906266) from listeria2 monocytogenes 4b f2365 at 1.50 a resolution Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	E	V	L	A	I	E	R	E	C	L	A	E	L	D	Q	Y	I	N	Q	N	F	T	L	A	C	E	K	M	F	W	C	K	G	K	V	V	V	M	G	M	G	K	S	G	H	I	G	R	K	M	A	A	T	F	A	S	T	G	T	P	S	F	F	V	H	P	G	E	A	A	H	G	D	L	G	M	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	X	T	Y	I	N	E	E	E	E	X	C	R	V	I	L	A	D	F	Q	T	N	A	E	K	L	E	S	L	V	K	N	G	A	K	E	W	L	I	L	A	T	G	S	S	L	N	A	A	Q	S	A	K	Y	Y	I	E	N	L	A	D	V	R	I	T	I	E	E	P	F	N	H	L	Y	Y	E	K	L	S	S
Template Known Secondary structure							T	T																								T	T			S																									S	S																			T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		P	Q	D	V	V	I	A	I	S	N	S	G	E	S	S	E	I	T	A	L	I	P	V	L	.	K	R	L	H	V	P	L	I	C	I	T	G	R	P	E	S	S	M	A	R	A	A	D	V	H	L	C	V	K	V	A	K	E	A	C	P	L	G	L	A	P	T	S	S	T	T	A	T	L	V	M	G	D	A	L
Query Conservation																										.
Alig confidence																										.																																		.	.	.
Template Conservation																																																												.	.	.
Template Sequence		H	L	D	L	V	I	G	I	S	Q	S	G	Q	S	T	S	T	I	S	A	L	E	R	V	K	K	E	A	S	V	P	V	V	A	L	T	S	D	V	T	S	E	I	A	E	F	A	D	I	T	L	D	I	G	S	G	K	E	.	.	.	R	V	G	Y	V	T	K	G	F	T	A	T	V	L	T	L	X	L	T
Template Known Secondary structure		T									S	S	S		B																							S		T	T	S	G	G	G	G	G		S						S					.	.	.		S	S	S		S
Template Predicted Secondary structure																																																												.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.				.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	A	L	L	K	A	R	G	F	T	A	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	H	F	A	Y	K	T	V	Q	I	D	E	T
Template Known Secondary structure									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions