Return to main results Retrieve Phyre Job Id

Job DescriptionP45395
Confidence69.29%DateThu Jan 5 12:02:32 GMT 2012
Rank191Aligned Residues69
% Identity22%Templatec1vkrA_
PDB info PDB header:transferaseChain: A: PDB Molecule:mannitol-specific pts system enzyme iiabc components; PDBTitle: structure of iib domain of the mannitol-specific permease enzyme ii
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   50..... ....60.........70.........80.........90.........100.........110.........120.. ..
Predicted Secondary structure 

...




















..

Query SS confidence 





. . .


































































. .

Query Sequence  GKVVVM. . . GMGKSGHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRL. . HV
Query Conservation   

 
 ...
 
 
   
      
   
                      



 

 

 
 
       

  ..
 
Alig confidence 





...































....










.........










..

Template Conservation 






  




 

   
   
    
           ....      




.........
  
           
Template Sequence  RKIIVACDAGMGSSAMGAGVLRKKIQDAGLSQISVTNSAIN. . . . NLPPDVDLVIT. . . . . . . . . HRDLTERAMRQVPQA
Template Known Secondary structure 


SSSSTT
TTS

TT....


TT
S.........
TTS
Template Predicted Secondary structure 








....






.........





Template SS confidence 















































































   378.380.........390.........400.........410........ .420......... 430.........440....
 
   125....130.
Predicted Secondary structure 

Query SS confidence 






Query Sequence  PLICITG
Query Conservation   

 

 
Alig confidence 






Template Conservation   

 
  
Template Sequence  QHISLTN
Template Known Secondary structure  S
Template Predicted Secondary structure 

Template SS confidence 






   445....450.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions