Job Description P45395 Confidence 86.70% Date Thu Jan 5 12:02:32 GMT 2012 Rank 142 Aligned Residues 137 % Identity 15% Template c1s1hB_ PDB info PDB header:ribosome Chain: B: PDB Molecule:40s ribosomal protein s0-a; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i. Resolution 11.70 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	E	L	D	Q	Y	I	N	Q	N	F	T	L	A	C	E	K	M	F	W	C	K	G	K	V	V	V	M	G	M	G	K	S	G	H	I	G	R	K	M	A	A	T	F	A	S	T	G	T	P	S	F	F	V	H	P	G	E	A	A	H	G	D	L	G	M	V	T	P	Q	D	V	V	I	A	I	S	N	S
Query Conservation
Alig confidence																			.	.
Template Conservation																			.	.
Template Sequence		V	G	K	T	W	E	K	L	V	L	A	A	R	I	I	A	A	.	.	I	P	N	P	E	D	V	V	A	I	S	S	R	T	F	G	Q	R	A	V	L	K	F	A	A	H	T	G	A	T	P	I	A	G	R	F	T	P	G	S	F	T	N	Y	I	T	R	S	F	K	E	P	R	L	V	I	V	T	D	P	R
Template Known Secondary structure																			.	.	T	T	T	T									S													T	S	S						S				T	T	T	T	T	T	T	T	T	S		S				S					S		T	T
Template Predicted Secondary structure																			.	.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	S	S	E	I	T	A	L	I	P	V	L	K	R	L	H	V	P	L	I	C	I	T	G	R	P	E	S	S	M	A	R	A	A	D	V	H	L	C	V	K	V	A	K	E	A	C	P	L	G	L	A	P	T	S	S	T	T	A	T	L	V	M	G	D	A	L	A	V	A	L	L	K	A	R	G
Query Conservation
Alig confidence				.	.	.	.																									.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.																									.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	D	.	.	.	.	A	Q	A	I	K	E	A	S	Y	V	N	I	P	V	I	A	L	T	D	L	D	S	P	S	.	.	E	F	V	D	V	A	I	P	C	N	N	R	.	.	.	.	.	.	.	.	.	.	.	.	G	K	H	S	I	G	L	I	W	Y	L	L	A	R	E	V	L	R	L	R	G
Template Known Secondary structure		T	T	.	.	.	.											T									T	T	S		G	.	.	G	G		S					S		S	S	.	.	.	.	.	.	.	.	.	.	.	.																					T
Template Predicted Secondary structure				.	.	.	.																									.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		127	.					.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.													.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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