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Job DescriptionP45395
Confidence86.70%DateThu Jan 5 12:02:32 GMT 2012
Rank142Aligned Residues137
% Identity15%Templatec1s1hB_
PDB info PDB header:ribosomeChain: B: PDB Molecule:40s ribosomal protein s0-a; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i.
Resolution11.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   27..30.........40.........50.........60.........70.........80.........90.........100......
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Query Sequence  LAELDQYINQNFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNS
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Template Sequence  VGKTWEKLVLAARIIAA. . IPNPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPR
Template Known Secondary structure  ..TTTT



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   4950.........60..... ....70.........80.........90.........100.........110.........120......
 
   107..110.........120.........130.........140.........150.........160.........170.........180...
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Query Sequence  GESSEITALIPVLKRLHVPLICITGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARG
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Template Sequence  SD. . . . AQAIKEASYVNIPVIALTDLDSPS. . EFVDVAIPCNNR. . . . . . . . . . . . GKHSIGLIWYLLAREVLRLRG
Template Known Secondary structure  TT....T


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   127. .130.........140.........150.. .......160.... .....170.........180.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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