Job Description P45395 Confidence 92.04% Date Thu Jan 5 12:02:32 GMT 2012 Rank 128 Aligned Residues 139 % Identity 11% Template c1h0hA_ PDB info PDB header:dehydrogenase Chain: A: PDB Molecule:formate dehydrogenase (large subunit); PDBTitle: tungsten containing formate dehydrogenase from2 desulfovibrio gigas Resolution 1.8 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.																		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.																					.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.																					.	.	.	.
Query Sequence		N	Q	N	F	T	L	A	C	E	K	M	F	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	K	G	K	V	V	V	M	G	M	G	K	S	G	H	I	G	R	K	M	A	A	T	F	A	.	S	T	G	T	P	S	F	F	V	H	P	G	E	A	A	H	G	D	L	G	.	.	.	.
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.																					.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.																					.	.	.	.
Template Conservation
Template Sequence		D	W	M	L	D	T	I	A	E	R	V	A	K	T	R	E	A	T	F	V	T	K	N	A	K	G	Q	V	V	N	R	C	D	G	I	A	S	V	G	S	A	A	M	D	N	E	E	C	W	I	Y	Q	A	W	L	R	S	L	G	L	F	Y	I	E	H	Q	A	R	I	H	S	A	T	V	A	A	L	A	E	S
Template Known Secondary structure																									T	T	S								S							T	T	S															T	T	B						G	G	G
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
													93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																							.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																							.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	M	V	T	P	Q	D	V	V	I	A	I	S	N	S	G	E	S	S	E	I	T	A	.	.	L	I	P	V	L	K	R	L	H	V	P	L	I	C	I	T	G	R	P	E	S	S	M	A	R	A	A	D	V	H	L	C	V	K	V	A	K	E	A	C	P	L	G	L	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																							.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																							.	.																		.																						.	.	.	.	.	.
Template Conservation																																																						.																						.	.	.	.	.	.
Template Sequence		Y	G	R	G	A	M	T	N	H	W	I	D	L	K	N	S	D	V	I	L	M	M	G	S	N	P	A	E	N	H	P	I	S	F	K	W	V	M	R	A	K	D	K	G	A	T	L	I	H	V	D	P	.	R	Y	T	R	T	S	T	K	C	D	L	Y	A	P	L	R	S	G	S	D	I	.	.	.	.	.	.
Template Known Secondary structure			S			S		S	S		T	G	G	G	G	G		S						S							S	T	T											T	T								S	.	S			T	T	G	G	G		S							T	T				.	.	.	.	.	.
Template Predicted Secondary structure																																																						.																						.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		P	T	S	S	T	T	A	T	L	V	M	G	D	A	L	A	V	A	L	L	K	A	.	.	.	R	G	F	T	A	E	D	F	A	L	S	H
Query Conservation																								.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	L	N	G	M	T	K	Y	I	L	E	K	E	L	Y	F	K	D	Y	V	V	N	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.													T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions