 |
Job Description | P0AEL8 | Confidence | 99.57% | Date | Thu Jan 5 11:23:39 GMT 2012 |
Rank | 48 | Aligned Residues | 69 |
% Identity | 30% | Template | d1p4wa_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| C-terminal effector domain of the bipartite response regulators
| GerE-like (LuxR/UhpA family of transcriptional regulators)
|
Resolution | UNK |
|
 |
  |   |
142 | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | N | S | S | T | V | T | V | L | S | N | R | E | V | T | I | L | R | Y | L | V | S | G | L | S | N | K | E | I | A | D | K | L | L | L | S | N | K | T | V | S | A | H | K | S | N | I | Y | G | K | L | G | L | H | S | I | V | E | L | I | D | Y | A | K | L | Y | E | L | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |
|   |
|
|
|
|   |   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|
|   |
|   |
|
|   |
|
|   |   |   |
|   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|
|   |
|
|   |   |
|
|   |   |
|   |   |
|   |
|   |   |   |
|
|   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |
|
|
|   |   |
|   |   |   |
|
|   |
Template Sequence |   |
A | G | G | Y | G | D | K | R | L | S | P | K | E | S | E | V | L | R | L | F | A | E | G | F | L | V | T | E | I | A | K | K | L | N | R | S | I | K | T | I | S | S | Q | K | K | S | A | M | M | K | L | G | V | D | N | D | I | A | L | L | N | Y | L | S | S | V | S | M | T |
Template Known Secondary structure |   |
|
|
|
| S | S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S | S |  |  |  |  |  |  |  |  |  |  |  | T |
| S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|