Job Description P0AEL8 Confidence 99.44% Date Thu Jan 5 11:23:39 GMT 2012 Rank 98 Aligned Residues 113 % Identity 19% Template c2jk1A_ PDB info PDB header:dna-binding Chain: A: PDB Molecule:hydrogenase transcriptional regulatory protein hupr1; PDBTitle: crystal structure of the wild-type hupr receiver domain Resolution 2.10 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	I	I	M	D	T	H	P	I	I	R	M	S	I	E	V	L	L	Q	K	N	S	E	L	Q	I	V	L	K	T	D	D	Y	R	I	T	I	D	Y	L	R	T	R	P	V	D	L	I	I	M	D	I	D	L	P	G	T	D	G	F	T	F	L	K	R	I	K	Q	I	Q	S	T	V	K	V	L	F	L	S
Query Conservation
Alig confidence																										.	.	.
Template Conservation																										.	.	.
Template Sequence		A	I	L	L	V	D	D	E	P	H	S	L	A	A	M	K	L	A	L	E	D	D	F	D	.	.	.	V	L	T	A	Q	G	A	E	A	A	I	A	I	L	E	E	E	W	V	Q	V	I	I	C	D	Q	R	M	P	G	R	T	G	V	D	F	L	T	E	V	R	E	R	W	P	E	T	V	R	I	I	I	T
Template Known Secondary structure								S	S												T	T	T	S		.	.	.					S	S											S									S			S	S	S														T	T	S
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		S	K	S	E	C	F	Y	A	G	R	A	I	.	Q	A	G	A	N	G	F	V	S	K	C	N	D	Q	N	D	I	F	H	A	V	Q	M	I
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		G	Y	T	D	S	A	S	M	M	A	A	I	N	D	A	G	I	H	Q	F	L	T	K	P	W	H	P	E	Q	L	L	S	S	A	R	N	A
Template Known Secondary structure		S		T	T											T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions