 |
Job Description | P23003 | Confidence | 99.30% | Date | Wed Jan 25 15:20:43 GMT 2012 |
Rank | 79 | Aligned Residues | 119 |
% Identity | 19% | Template | d1yb2a1 |
SCOP info | S-adenosyl-L-methionine-dependent methyltransferases
| S-adenosyl-L-methionine-dependent methyltransferases
| tRNA(1-methyladenosine) methyltransferase-like
|
Resolution | 2.01 |
|
 |
  |   |
210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | |
|
|
. | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | |
. | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
| . | . | . |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | K | G | D | L | L | E | L | Y | C | G | N | G | N | F | S | L | A | L | A | R | N | . |
. |
. |
F | D | R | V | L | A | T | E | I | A | K | P | S | V | A | A | A | Q | Y | N | I | A | A | N | H | I | . |
D | N | V | Q | I | I | R | M | A | A | E | E | F | T | Q | A | M | N | G | V | R | E | F | N | R | L | Q | G |
Query Conservation |   |
  |   |   |   |
|
|
|
|   |
|
|   |
|   |   |
|
|   |
|
|   |   | . | . | . |   |   |   |
|   |
|
|
|   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |
| . |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|
|   |   |
|
|
|
|
|   |
|
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|   |
|   |   |
|
|   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |
|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
P | G | X | D | I | L | E | V | G | V | G | S | G | N | X | S | S | Y | I | L | Y | A | L | N | G | K | G | T | L | T | V | V | E | R | D | E | D | N | L | K | K | A | X | D | N | L | S | E | F | Y | D | I | G | N | V | R | T | S | R | S | D | I | A | D | F | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |  |
|
| T | T | S |  |  |  |  |  |  |  |  |  |  | T | T | S | S |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
| T | T |  |  |  |  |
| S |
| T | T | T |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
286 | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | |
. | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | |
. | 340 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Query Sequence |   |
I | D | L | K | S | Y | Q | C | E | T | I | F | V | D | P | P | R | S | G | L | . |
D | S | E | T | E | K | M | V | Q | A | Y | P | R | I | L | Y | I | S | C | N | P | E | T | L | C | K | N | L | E | T | L | S | Q | . |
T | H | K | V | E | R | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|   |
|   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|   |
|
|   |
|
|
|   |   |
|   |   | . |   |
|   |   |   |   |   |
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . |   |   |   |   |   |
|   |
|   |
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |   |
|   |   |
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
. |
. |
. |
S | D | Q | X | Y | D | A | V | I | A | D | I | P | D | P | W | N | H | V | Q | K | I | A | S | X | X | K | P | G | S | V | A | T | F | Y | L | P | N | F | D | Q | S | E | K | T | V | L | S | L | S | A | S | G | X | H | H | L | E | T |
Template Known Secondary structure |   |
. | . | . |
| S |
|
|  |  |  |  |  |  |
|
| S |
| G | G | G | S |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  | S | G | G | G | T |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|