Return to main results Retrieve Phyre Job Id

Job DescriptionP23003
Confidence58.51%DateWed Jan 25 15:20:43 GMT 2012
Rank346Aligned Residues78
% Identity17%Templated1p3da1
SCOP infoMurCD N-terminal domain MurCD N-terminal domain MurCD N-terminal domain
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   218.220.........230.........240.........250.........260.........270.........280.........290.......
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  YCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIF
Query Conservation   

 
  

 

     
 


    

  
  
   
 
 
                                  
  
Alig confidence 

































......











...................








Template Conservation   

 



  
   
  
   
         
  ......            ................... 
   
 

Template Sequence  GAGXSGIAEILLNEGYQISGSDIADGVVTQRLAQ. . . . . . AGAKIYIGHAEE. . . . . . . . . . . . . . . . . . . HIEGASVVV
Template Known Secondary structure  STTT
S

S......TT
S

GG...................GGTT
S
Template Predicted Secondary structure 









......





...................




Template SS confidence 















































































   28.30.........40.........50.........60. ........70... ......80..
 
   298.300.........310.........320
Predicted Secondary structure 








Query SS confidence 






















Query Sequence  VDPPRSGLDSETEKMVQAYPRIL
Query Conservation   



 
              

Alig confidence 






















Template Conservation   



    
 
  
   

 

Template Sequence  VSSAIKDDNPELVTSKQKRIPVI
Template Known Secondary structure 
TTS
TT
TT

Template Predicted Secondary structure 











Template SS confidence 






















   83......90.........100.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions