Job Description P23003 Confidence 98.64% Date Wed Jan 25 15:20:43 GMT 2012 Rank 206 Aligned Residues 152 % Identity 13% Template d1mjfa_ SCOP info S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases Spermidine synthase Resolution 1.80

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		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.											.	.	260	.	.	.	.	.	.
Predicted Secondary structure																																					.																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.																										.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	M	L	E	W	A	L	D	V	T	K	G	S	K	G	D	L	L	E	L	Y	C	G	N	G	N	F	S	L	A	L	A	R	N	F	.	D	R	V	L	A	T	E	I	A	K	P	S	V	A	A	A	Q	Y	N	I	A	A	N	H	I	.	.	.	.	.	.	.	.	.	.	D	N	V	Q	I	I	R	M	A
Query Conservation																																					.																										.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.																										.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	P	L	V	H	P	A	M	L	A	H	P	K	P	K	R	V	L	V	I	G	G	G	D	G	G	T	V	R	E	V	L	Q	H	D	V	D	E	V	I	M	V	E	I	D	E	D	V	I	M	V	S	K	D	L	I	K	I	D	N	G	L	L	E	A	M	L	N	G	K	H	E	K	A	K	L	T	I	G	D
Template Known Secondary structure												S	S											T	T	S							T	T	S			S							S												T		T	T	T	T							T	T			S	S						S
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.						.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.				.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.																	.				.	.	.
Query SS confidence																																									.	.	.	.	.																	.				.	.	.
Query Sequence		A	E	E	F	T	Q	A	M	N	G	V	R	E	F	N	R	L	Q	G	I	D	L	K	S	Y	Q	C	E	T	I	F	V	D	P	P	R	S	G	L	.	.	.	.	.	D	S	E	T	E	K	M	V	Q	A	Y	P	R	I	L	Y	.	I	S	C	.	.	.	N	P	E	T	L	C	K	N	L	E	T	L	S
Query Conservation																																									.	.	.	.	.																	.				.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.																	.				.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	F	E	F	I	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	G	F	D	V	I	I	A	D	S	T	D	P	V	L	F	S	E	E	F	Y	R	Y	V	Y	D	A	L	N	N	P	G	I	Y	V	T	Q	A	G	S	V	Y	L	F	T	D	E	L	I	S	A	Y	K	E	M	K
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T	T	S																								T	T	T	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.																	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	H	K	V	E	R	L	A	L	F	D	Q	F	P	Y	T	H	H	M	E	C	G	V	L	L	T	A	K
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		K	V	F	D	R	V	Y	Y	Y	S	F	P	V	I	G	Y	A	S	P	.	W	A	F	L	V	G	V	K	G
Template Known Secondary structure					S										T	T	S	S	S	S	.									S
Template Predicted Secondary structure																					.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions