Return to main results Retrieve Phyre Job Id

Job DescriptionP23003
Confidence98.73%DateWed Jan 25 15:20:43 GMT 2012
Rank185Aligned Residues154
% Identity11%Templated1inla_
SCOP infoS-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases Spermidine synthase
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   198.200.........210.........220.........230. ........240.........250....... ..260.........270.
Predicted Secondary structure 












..






....



Query SS confidence 

































. .

























. . . .













Query Sequence  QMLEWALDVTKGSKGDLLELYCGNGNFSLALARN. . FDRVLATEIAKPSVAAAQYNIAANHI. . . . DNVQIIRMAAEEFT
Query Conservation   
   
          



 

 
  

 

  ..   
 


    

  
  
   
 
.... 
            
Alig confidence 

































..

























....













Template Conservation 
 
 
  
     







 
 
     

       
  



  


 

           
 

 
   

   
Template Sequence  EMLAHVPMFLHPNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYV
Template Known Secondary structure  SSS


TT
TTSTT
SS

GGGG
TTS
G
Template Predicted Secondary structure 

































Template SS confidence 















































































   78.80.........90.........100.........110.........120.........130.........140.........150.......
 
   272.......280.........290......... 300.........310.........320.... .....330.........340......
Predicted Secondary structure 


















.








....




Query SS confidence 



























.
























. . . .





















Query Sequence  QAMNGVREFNRLQGIDLKSYQCETIFVD. PPRSGLDSETEKMVQAYPRILYISC. . . . NPETLCKNLETLSQTHKVERLA
Query Conservation                        
  
 
.


 
              





.... 
 

 


  
   
      
Alig confidence 

...............










.
























....





















Template Conservation    ...............    




 
 
 
 

       
 





 
  
          
  

  

  
  
Template Sequence  RK. . . . . . . . . . . . . . . FKNEFDVIIIDSLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRVY
Template Known Secondary structure  GG...............
SS



S


TTTT
S
Template Predicted Secondary structure 

...............

























Template SS confidence 















































































   158. 160.........170.........180.........190.........200.........210.........220..
 
   347..350.........360......
Predicted Secondary structure 







Query SS confidence 



















Query Sequence  LFDQFPYTHHMECGVLLTAK
Query Conservation    
 

 
 


 
  
 

Alig confidence 



















Template Conservation     



  
 
 
  

  
Template Sequence  LGFMTTYPSGMWSYTFASKG
Template Known Secondary structure 
TTSTTSSS
Template Predicted Secondary structure 










Template SS confidence 



















   233......240.........250..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions