Job Description P23003 Confidence 98.53% Date Wed Jan 25 15:20:43 GMT 2012 Rank 225 Aligned Residues 136 % Identity 17% Template c3swrA_ PDB info PDB header:transferase Chain: A: PDB Molecule:dna (cytosine-5)-methyltransferase 1; PDBTitle: structure of human dnmt1 (601-1600) in complex with sinefungin Resolution 2.49 Å

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		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																													.				.
Query SS confidence																													.				.
Query Sequence		T	K	G	S	K	G	D	L	L	E	L	Y	C	G	N	G	N	F	S	L	A	L	A	R	N	F	D	.	R	V	L	.	A	T	E	I	A	K	P	S	V	A	A	A	Q	Y	N	I	A	A	N	H	I	D	N	V	Q	I	I	R	M	A	A	E	E	F	T	Q	A	M	N	G	V	R	E	F	N	R	L	Q
Query Conservation																													.				.
Alig confidence																													.				.																.	.	.	.	.
Template Conservation																																																	.	.	.	.	.
Template Sequence		I	K	L	P	K	L	R	T	L	D	V	F	S	G	C	G	G	L	S	E	G	F	H	Q	A	G	I	S	D	T	L	W	A	I	E	M	W	D	P	A	A	Q	A	F	R	L	N	.	.	.	.	.	N	P	G	S	T	V	F	T	E	D	C	N	I	L	L	K	L	V	M	A	G	E	T	T	N	S	R	G
Template Known Secondary structure													S		T	T	S										T	S									S	S											.	.	.	.	.		T	T	S					S												T		S	B		T	T
Template Predicted Secondary structure																																																	.	.	.	.	.
Template SS confidence
		1134	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180						.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.																			.	.	.	.	.	.	.	.	310	.	.	.	.			.	.	.	.	.	320	.	.								.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.									.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.									.	.	.	.	.	.	.
Query Sequence		G	I	D	L	K	S	Y	Q	C	E	T	I	F	V	D	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	G	L	D	S	E	T	E	K	M	V	Q	.	.	A	Y	P	R	I	L	Y	I	.	.	.	.	.	.	.	S	C	N	P	E	T	L	C	K	N	L	E	T	L	S
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.									.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.									.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	R	L	P	Q	K	G	D	V	E	M	L	C	G	G	P	P	C	Q	G	F	S	G	M	N	R	F	N	S	R	T	Y	S	K	F	K	N	S	L	V	V	S	F	L	S	Y	C	D	Y	Y	R	P	R	F	F	L	L	E	N	V	R	N	F	V	S	F	K	R	S	M	V	L	K	L	T	L	R	C	L	V
Template Known Secondary structure			B				T	T	T		S									T	T			S	S	S											T	T	S															S								G	G	G	G	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		1209	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.
		338		.	340	.	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		Q	.	T	H	K	V	E	R	L	A	L
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		R	M	G	Y	Q	C	T	F	G	V	L
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		1289	1290	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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