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Job DescriptionP23003
Confidence98.53%DateWed Jan 25 15:20:43 GMT 2012
Rank225Aligned Residues136
% Identity17%Templatec3swrA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dna (cytosine-5)-methyltransferase 1; PDBTitle: structure of human dnmt1 (601-1600) in complex with sinefungin
Resolution2.49 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   207..210.........220.........230... ... ...240.........250.........260.........270.........280....
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Query Sequence  TKGSKGDLLELYCGNGNFSLALARNFD. RVL. ATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQ
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Template Sequence  IKLPKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLN. . . . . NPGSTVFTEDCNILLKLVMAGETTNSRG
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   1134.....1140.........1150.........1160.........1170.........1180 .........1190.........1200........
 
   285....290.........300. ........310.... .....320.. .......330.......
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Query Sequence  GIDLKSYQCETIFVDPP. . . . . . . . . . . . . . . . . . RSGLDSETEKMVQ. . AYPRILYI. . . . . . . SCNPETLCKNLETLS
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Template Sequence  QRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLV
Template Known Secondary structure 
B


TTT
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TT

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SGGGGTTGGG
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   12091210.........1220.........1230.........1240.........1250.........1260.........1270.........1280........
 
   338 .340.......
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Query Sequence  Q. THKVERLAL
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Template Sequence  RMGYQCTFGVL
Template Known Secondary structure  T
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   12891290.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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