Return to main results Retrieve Phyre Job Id

Job DescriptionP23003
Confidence98.28%DateWed Jan 25 15:20:43 GMT 2012
Rank247Aligned Residues93
% Identity19%Templatec3pt9A_
PDB info PDB header:transferaseChain: A: PDB Molecule:dna (cytosine-5)-methyltransferase 1; PDBTitle: crystal structure of mouse dnmt1(731-1602) in the free state
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   207..210.........220.........230... .. ....240.........250.........260.........270.........280....
Predicted Secondary structure 














..
















Query SS confidence 


























.

.
















































Query Sequence  TKGSKGDLLELYCGNGNFSLALARNFD. RV. LATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQ
Query Conservation         



 

 
  

 

    . 
. 


    

  
  
   
 
 
                         
Alig confidence 


























.

.















.....



























Template Conservation      

  





 

 
 

  

      
 
    
  

  
..... 
       
    
             
Template Sequence  IKLPKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLN. . . . . NPGTTVFTEDCNVLLKLVMAGEVTNSLG
Template Known Secondary structure 




T
TTSTS
SS.....
TTS
S
TT
SB
TTS
Template Predicted Secondary structure 

















.....













Template SS confidence 















































































   1137..1140.........1150.........1160.........1170.........1180... ......1190.........1200.........1210.
 
   285....290.........300....
Predicted Secondary structure 















Query SS confidence 



















Query Sequence  GIDLKSYQCETIFVDPPRSG
Query Conservation           
  
 



 
Alig confidence 



















Template Conservation    

  
 



 





 
Template Sequence  QRLPQKGDVEMLCGGPPCQG
Template Known Secondary structure 
B


TTT
S




S
Template Predicted Secondary structure 











Template SS confidence 



















   1212.......1220.........1230.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions