Job Description P23003 Confidence 99.39% Date Wed Jan 25 15:20:43 GMT 2012 Rank 63 Aligned Residues 152 % Identity 18% Template c3mb5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of p. abyssi trna m1a58 methyltransferase in complex2 with s-adenosyl-l-methionine Resolution 1.60 Å

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		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.				.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																		.																				.	.	.																											.
Query SS confidence																		.																				.	.	.																											.
Query Sequence		I	Q	M	L	E	W	A	L	D	V	T	K	G	S	K	G	.	D	L	L	E	L	Y	C	G	N	G	N	F	S	L	A	L	A	R	N	.	.	.	F	D	R	V	L	A	T	E	I	A	K	P	S	V	A	A	A	Q	Y	N	I	A	A	N	H	I	.	D	N	V	Q	I	I	R	M	A	A	E	E	F	T
Query Conservation																		.																				.	.	.																											.
Alig confidence																		.																				.	.	.																											.
Template Conservation
Template Sequence		P	K	D	A	A	L	I	V	A	Y	A	G	I	S	P	G	D	F	I	V	E	A	G	V	G	S	G	A	L	T	L	F	L	A	N	I	V	G	P	E	G	R	V	V	S	Y	E	I	R	E	D	F	A	K	L	A	W	E	N	I	K	W	A	G	F	D	D	R	V	T	I	K	L	K	D	I	Y	E	G	I
Template Known Secondary structure												T	T			T	T									T	T	S												T	T	S							S																T		T	T	T						S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																																				.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	M	N	G	V	R	E	F	N	R	L	Q	G	I	D	L	K	S	Y	Q	C	E	T	I	F	V	D	P	P	R	S	G	L	.	D	S	E	T	E	K	M	V	Q	A	Y	P	R	I	L	Y	I	S	C	N	P	E	T	L	C	K	N	L	E	T	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																				.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	E	N	V	D	H	V	I	L	D	L	P	Q	P	E	R	V	V	E	H	A	A	K	A	L	K	P	G	G	F	F	V	A	Y	T	P	C	S	N	Q	V	M	R	L	H	E	K	L	R	E	F	K	D	Y	F	M	K	P	R	T	I	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S								S	S		G	G	G	G																			S	S														T	G	G	G	B	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
					338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	Q	T	H	K	V	E	R	L	A	L	F	D	Q	F	P	Y	T	H	H	M	E	C	G	V	L	L	T	A
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		V	L	V	F	D	Q	E	V	K	K	E	C	M	R	P	R	T	T	A	L	V	H	T	G	Y	I	T	F	A	R	R
Template Known Secondary structure											T	T						S						S								B
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions