Job Description P23003 Confidence 99.32% Date Wed Jan 25 15:20:43 GMT 2012 Rank 75 Aligned Residues 161 % Identity 17% Template c3id5F_ PDB info PDB header:transferase/ribosomal protein/rna Chain: F: PDB Molecule:fibrillarin-like rrna/trna 2'-o-methyltransferase; PDBTitle: crystal structure of sulfolobus solfataricus c/d rnp assembled with2 nop5, fibrillarin, l7ae and a split half c/d rna Resolution 4.01 Å

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		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.				.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																											.																						.	.	.
Query SS confidence																											.																						.	.	.
Query Sequence		F	T	Q	P	N	A	A	M	N	I	Q	M	L	E	W	A	L	D	V	T	K	G	S	K	G	.	D	L	L	E	L	Y	C	G	N	G	N	F	S	L	A	L	A	R	N	F	D	.	.	.	R	V	L	A	T	E	I	A	K	P	S	V	A	A	A	Q	Y	N	I	A	A	N	H	I	D	N	V	Q	I	I
Query Conservation																											.																						.	.	.
Alig confidence																											.																						.	.	.																							.	.
Template Conservation																																																																										.	.
Template Sequence		E	W	N	A	F	R	S	K	L	A	G	A	I	L	K	G	L	K	T	N	P	I	R	K	G	T	K	V	L	Y	L	G	A	A	S	G	T	T	I	S	H	V	S	D	I	I	E	L	N	G	K	A	Y	G	V	E	F	S	P	R	V	V	R	E	L	L	L	V	A	Q	R	R	.	.	P	N	I	F	P	L
Template Known Secondary structure					T	T	T									T	T		S						T	T							T		T	T	S												T	T	S																							.	.	T	T
Template Predicted Secondary structure																																																																										.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.					.	.	.	.	.	.	.	.	320	.	.	.	.	.	.						.	.	.	330	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.																.	.	.	.	.
Query SS confidence																																																		.	.	.	.																.	.	.	.	.
Query Sequence		R	M	A	A	E	E	F	T	Q	A	M	N	G	V	R	E	F	N	R	L	Q	G	I	D	L	K	S	Y	Q	C	E	T	I	F	V	D	P	P	R	S	G	L	D	S	E	T	E	K	.	.	.	.	M	V	Q	A	Y	P	R	I	L	Y	I	S	C	N	P	.	.	.	.	.	E	T	L	C	K	N	L	E
Query Conservation																																																		.	.	.	.																.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.																.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	D	A	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	S	Y	K	S	V	V	E	N	V	D	V	L	Y	V	D	I	A	Q	P	D	Q	T	D	I	A	I	Y	N	A	K	F	F	L	K	V	N	G	D	M	L	L	V	I	K	A	V	T	K	D	P	K	E	I	Y	K	T	E	V	E
Template Known Secondary structure					T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	T	T	T	T												S		T	T																													S	S	S	S	S	T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		131	.	.	.	.	.														.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		335	.	.	.		.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		T	L	S	Q	.	T	H	K	V	E	R	L	A	L	F	D	Q	F	P	Y	T	H	H	M	E	C	G	V	L	L	T	A	K
Query Conservation						.
Alig confidence						.																		.	.	.
Template Conservation																								.	.	.
Template Sequence		K	L	E	N	S	N	F	E	T	I	Q	I	I	N	L	D	P	Y	D	K	D	H	.	.	.	A	I	V	L	S	K	Y	K
Template Known Secondary structure					T	T	T										T	T	T	S	S	S		.	.	.
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.				.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions