 |
Job Description | P23003 | Confidence | 99.64% | Date | Wed Jan 25 15:20:43 GMT 2012 |
Rank | 25 | Aligned Residues | 103 |
% Identity | 20% | Template | c3gdhC_ |
PDB info |
PDB header:transferase | Chain: C: PDB Molecule:trimethylguanosine synthase homolog; |
PDBTitle: methyltransferase domain of human trimethylguanosine2 synthase 1 (tgs1) bound to m7gtp and adenosyl-homocysteine3 (active form)
|
Resolution | 2.00 Å |
|
 |
  |   |
187 | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | |
. | 260 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Query Sequence |   |
S | F | T | Q | P | N | A | A | M | N | I | Q | M | L | E | W | A | L | D | V | T | K | G | S | K | G | D | L | L | E | L | Y | C | G | N | G | N | F | S | L | A | L | A | R | N | F | D | R | V | L | A | T | E | I | A | K | P | S | V | A | A | A | Q | Y | N | I | A | A | N | H | I | D | . |
N | V | Q | I | I | R | M |
Query Conservation |   |
|
|
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |
|   |   |
|
|   |
|
|   |   |   |   |   |
|   |
|
|
|   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |
|   | . |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|
|   |   |
|   |   |
|
|   |   |   |   |   |   | . |   |   |   |   |   |
|
|
|   |   |
|
|   |
|   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |
|
|   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
G | W | F | S | V | T | P | E | K | I | A | E | H | I | A | G | R | V | S | Q | S | . |
F | K | C | D | V | V | V | D | A | F | C | G | V | G | G | N | T | I | Q | F | A | L | T | G | M | R | V | I | A | I | D | I | D | P | V | K | I | A | L | A | R | N | N | A | E | V | Y | G | I | A | D | K | I | E | F | I | C | G |
Template Known Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | S | . | T | T |
|
|  |  |  |  | T | T |
| T | T | S |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| G | G | G |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
668 | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | |
. | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . |
  |
  |   |
266 | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | E | E | F | T | Q | A | M | N | G | V | R | E | F | N | R | L | Q | G | I | D | L | K | S | Y | Q | C | E | T | I | F | V | D | P | P | R | S | G | L | D | S |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |
Template Sequence |   |
D | F | L | L | L | A | S | F | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | A | D | V | V | F | L | S | P | P | W | G | G | P | D | Y |
Template Known Secondary structure |   |
|  |  |  |  | G | G | G |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
| S |  |  |  |  |
|
|
|
|
| S | G | G | G |
Template Predicted Secondary structure |   |
|  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
747 | . | . | 750 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|