Job Description P23003 Confidence 50.03% Date Wed Jan 25 15:20:43 GMT 2012 Rank 357 Aligned Residues 108 % Identity 11% Template c3fwzA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:inner membrane protein ybal; PDBTitle: crystal structure of trka-n domain of inner membrane protein ybal from2 escherichia coli Resolution 1.79 Å

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		217	.	.	220	.	.	.	.	.	.	.	.	.					230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		L	Y	C	G	N	G	N	F	S	L	A	L	A	.	.	.	.	R	N	F	D	R	V	L	A	T	E	I	A	K	P	S	V	A	A	A	Q	Y	N	I	A	A	N	H	I	D	N	V	Q	I	I	R	M	A	A	E	E	F	T	Q	A	M	N	G	V	R	E	F	N	R	L	Q	G	I	D	L	K	S	Y	Q
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.																						.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	V	G	Y	G	R	V	G	S	L	L	G	E	K	L	L	A	S	D	I	P	L	V	V	I	E	T	S	R	T	R	V	D	E	L	R	E	.	.	.	.	.	.	.	R	G	V	R	A	V	L	G	N	A	A	N	E	E	I	X	Q	L	A	.	.	.	.	.	.	.	.	.	.	.	.	H	L	E	C
Template Known Secondary structure							S													T	T								S											.	.	.	.	.	.	.	T	T						S		T	T	S							T	.	.	.	.	.	.	.	.	.	.	.	.	T	G	G	G
Template Predicted Secondary structure																																								.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.								.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.													.	.	480	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.			.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		C	E	T	I	F	V	D	P	P	R	S	G	L	D	S	E	T	E	K	M	V	Q	A	.	.	Y	P	R	I	L	Y	I	S	C	N	P	E	T	L	C	K	N	L	E	T	L	S	Q	T	H	K	V	E
Query Conservation																									.	.
Alig confidence																									.	.
Template Conservation
Template Sequence		A	K	W	L	I	L	T	I	P	N	G	Y	E	A	G	E	I	V	A	S	A	R	A	K	N	P	D	I	E	I	I	A	R	A	H	Y	D	D	E	V	A	Y	I	T	E	R	G	A	N	Q	V	V	X
Template Known Secondary structure			S							S																	S	S	S							S	S										T	T		S
Template Predicted Secondary structure
Template SS confidence
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions