Job Description P23003 Confidence 98.85% Date Wed Jan 25 15:20:43 GMT 2012 Rank 164 Aligned Residues 152 % Identity 14% Template c3fteA_ PDB info PDB header:transferase/rna Chain: A: PDB Molecule:dimethyladenosine transferase; PDBTitle: crystal structure of a. aeolicus ksga in complex with rna Resolution 3.00 Å

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		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																	.																						.
Query SS confidence																	.																						.
Query Sequence		N	I	Q	M	L	E	W	A	L	D	V	T	K	G	S	.	K	G	D	L	L	E	L	Y	C	G	N	G	N	F	S	L	A	L	A	R	N	.	F	D	R	V	L	A	T	E	I	A	K	P	S	V	A	A	A	Q	Y	N	I	A	A	N	H	I	D	N	V	Q	I	I	R	M	A	A	E	E	F	T	Q	A
Query Conservation																	.																						.
Alig confidence																	.																						.																				.	.	.	.
Template Conservation																																																											.	.	.	.
Template Sequence		S	E	G	V	L	K	K	I	A	E	E	L	N	I	E	E	G	N	T	V	V	E	V	G	G	G	T	G	N	L	T	K	V	L	L	Q	H	P	L	K	K	L	Y	V	I	E	L	D	R	E	M	V	E	N	L	K	S	.	.	.	.	I	G	D	E	R	L	E	V	I	N	E	D	A	S	K	F	P	F	C
Template Known Secondary structure																	T	T							S			S	S							T	T	S			S							S		T	T	T	G	G	G	G		S	.	.	.	.	S			T	T	B			B		S		T	T	S			G	G
Template Predicted Secondary structure																																																											.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.				.	.	.	.	.	320	.	.												.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	N	G	V	R	E	F	N	R	L	Q	G	I	D	L	K	S	Y	Q	C	E	T	I	F	V	D	P	P	R	S	G	L	D	S	E	T	E	K	M	V	Q	.	.	.	A	Y	P	R	I	L	Y	I	.	.	.	.	.	.	.	.	.	.	.	S	C	N	P	E	T	L	C	K	N	L	E	T	L	S	Q	T
Query Conservation																																											.	.	.									.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.									.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	L	K	V	V	G	N	L	P	Y	N	V	A	S	L	I	I	E	N	T	V	Y	N	K	D	C	V	P	L	A	V	F	M	V	Q	K	E	V	A	E	K	L	Q	G	K	K	D	T	G	W	L	S	V	F	V	R	T	F	Y	D	V
Template Known Secondary structure		G	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	B								T	T	T										T	T	G	G	G		S																S	S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.																.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	K	V	E	R	L	A	L	F	D	Q	F	P	Y	T	H	H	M	E	C	G	V	L	L	T	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Y	V	M	T	V	P	P	R	F	F	V	P	P	P	K	V	Q	S	A	V	I	K	L	V	K	N
Template Known Secondary structure									T	T	S	S	S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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