Job Description P23003 Confidence 59.76% Date Wed Jan 25 15:20:43 GMT 2012 Rank 344 Aligned Residues 140 % Identity 17% Template c3fkqA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ntrc-like two-domain protein; PDBTitle: crystal structure of ntrc-like two-domain protein (rer070207001320)2 from eubacterium rectale at 2.10 a resolution Resolution 2.10 Å

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		196	.	.	.	200	.	.	.	.	.	.													.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.										.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	I	Q	M	L	E	W	A	L	D	V	.	.	.	.	.	.	.	.	.	.	.	.	T	K	G	S	K	G	D	L	L	E	L	Y	C	G	N	G	.	.	.	.	.	.	.	.	.	N	F	S	L	A	L	A	R	N	F	D	R	V	L	A	T	E	I	A	K	P	.	.	.	.	.	.	.	.	.	.	.
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	D	V	I	F	K	Q	I	L	G	V	Y	S	D	X	A	A	N	V	A	T	I	S	G	E	N	D	K	S	S	V	V	I	F	T	S	P	C	G	G	V	G	T	S	T	V	A	A	A	C	A	I	A	H	A	N	X	G	K	K	V	F	Y	L	N	I	E	Q	C	G	T	T	D	V	F	F	Q	A	E	G
Template Known Secondary structure																				T							T	T	S									S	S	T	T	S	S																T										T	T										S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
																		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	A	A	A	Q	Y	N	I	A	A	N	H	I	D	N	V	Q	I	I	R	M	A	A	E	E	F	T	Q	A	M	N	G	V	R	E	F	N	R	L	Q	G	I	D	L	K	S	Y	Q	C	E	T	I	F	V	D	P	P	R	S	G	L	D	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																												.
Template Conservation																																																																													.
Template Sequence		N	A	T	X	S	D	V	I	Y	S	L	K	S	R	K	A	N	L	L	L	K	L	E	S	C	I	K	Q	S	Q	E	G	V	S	Y	F	S	S	T	K	V	A	L	D	I	L	E	I	S	Y	A	D	I	D	T	L	I	G	N	I	Q	G	X	D	N	Y	D	E	I	I	V	D	L	P	F	.	S	L	E	I
Template Known Secondary structure		S												S			S									T					T	T	S								S	S	G	G	G	G	G	G																T	S			S									.
Template Predicted Secondary structure																																																																													.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		E	T	E	K	M	V	Q	A	Y	P	R	I	L	Y	I	.	S	C	N	P	E	T	L	C	K	N	L	E	T	L
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		E	K	L	K	L	L	S	K	A	W	R	I	I	V	V	N	D	G	S	Q	L	S	N	Y	K	F	X	R	A	Y
Template Known Secondary structure								T	T		S
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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