Job Description P23003 Confidence 29.35% Date Wed Jan 25 15:20:43 GMT 2012 Rank 397 Aligned Residues 78 % Identity 15% Template c3cu5B_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:two component transcriptional regulator, arac family; PDBTitle: crystal structure of a two component transcriptional regulator arac2 from clostridium phytofermentans isdg Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.				300	.	.	.	.	.	.		.	.
Predicted Secondary structure																															.																																						.	.	.								.
Query SS confidence																															.																																						.	.	.								.
Query Sequence		R	V	L	A	T	E	I	A	K	P	S	V	A	A	A	Q	Y	N	I	A	A	N	H	I	D	N	V	Q	I	.	I	R	M	A	A	E	E	F	T	Q	A	M	N	G	V	R	E	F	N	R	L	Q	G	I	D	L	K	S	Y	Q	C	E	T	I	F	V	D	.	.	.	P	P	R	S	G	L	D	.	S	E
Query Conservation																															.																																						.	.	.								.
Alig confidence																															.																.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.								.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	L	I	V	D	D	E	K	L	T	R	D	G	L	I	A	N	I	N	W	K	A	L	S	F	D	Q	I	D	Q	A	D	D	G	I	N	A	I	Q	I	A	L	K	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	N	V	L	L	T	D	V	R	M	P	R	M	D	G	I	E	L	V	D
Template Known Secondary structure								S											T	S		T	T	T	S									S	S											S	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S						S			T	T	S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.															.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	K	M	V	Q	A	Y	P	R	I	L	Y	I	S	C	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	L	K	L	Y	P	D	C	S	V	I	F	M	S	G	Y
Template Known Secondary structure								T	T									T
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions