Job Description P23003 Confidence 44.71% Date Wed Jan 25 15:20:43 GMT 2012 Rank 370 Aligned Residues 76 % Identity 11% Template c3b2nA_ PDB info PDB header:transcription Chain: A: PDB Molecule:uncharacterized protein q99uf4; PDBTitle: crystal structure of dna-binding response regulator, luxr family, from2 staphylococcus aureus Resolution 2.04 Å

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		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.				300	.	.	.	.	.	.		.	.	.
Predicted Secondary structure																																																																				.	.	.								.
Query SS confidence																																																																				.	.	.								.
Query Sequence		R	V	L	A	T	E	I	A	K	P	S	V	A	A	A	Q	Y	N	I	A	A	N	H	I	D	N	V	Q	I	I	R	M	A	A	E	E	F	T	Q	A	M	N	G	V	R	E	F	N	R	L	Q	G	I	D	L	K	S	Y	Q	C	E	T	I	F	V	D	.	.	.	P	P	R	S	G	L	D	.	S	E	T
Query Conservation																																																																				.	.	.								.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.								.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	I	I	A	E	D	Q	N	M	L	R	Q	A	M	V	Q	L	I	K	L	H	G	D	F	E	I	L	A	D	T	D	N	G	L	D	A	M	K	L	I	E	E	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	N	V	V	I	L	D	I	E	M	P	G	M	T	G	L	E	V	L	A	E
Template Known Secondary structure								S																S	S								S													.	.	.	.	.	.	.	.	.	.	.	.	.	.			S						S	S		S	S	S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.															.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	M	V	Q	A	Y	P	R	I	L	Y	I	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	K	K	H	L	N	I	K	V	I	I	V	T
Template Known Secondary structure					T	T		S
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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