Return to main results Retrieve Phyre Job Id

Job DescriptionP23003
Confidence99.86%DateWed Jan 25 15:20:43 GMT 2012
Rank16Aligned Residues219
% Identity14%Templatec3a26A_
PDB info PDB header:transferaseChain: A: PDB Molecule:uncharacterized protein ph0793; PDBTitle: crystal structure of p. horikoshii tyw2 in complex with2 mesado
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   119120.........130.........140.........150.........160.........170.........180.........190........
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  VVSLLYHKKLDDEWRQEAEALRDALRAQNLNVHLIGRATKTKIELDQDYIDERLPVAGKEMIYRQVENSFTQPNAAMNIQ
Query Conservation   
  
               
                            
   
        
 
 
 



 
      
Alig confidence 






























.....


















...





















Template Conservation 
               
         
    .....
      
 
        
... 
  
  
     
      
 
Template Sequence  VLLLPLRPELEPYKHRIAEVYAEVLGVKTVL. . . . . RKGDYELLYGSDTVTVHVE. . . NGIKYKLDVAKIMFSPANVKER
Template Known Secondary structure 


GGGGGGT
S.....





S

...TTTTTS


GGG
Template Predicted Secondary structure 





.....






...










Template SS confidence 















































































   36...40.........50.........60...... ...70.........80..... ....90.........100.......
 
   199200.........210.........220.........230.. .......240.........250......... 260.........270......
Predicted Secondary structure 













.







.

Query SS confidence 

































.


























.
















Query Sequence  MLEWALDVTKGSKGDLLELYCGNGNFSLALARNF. DRVLATEIAKPSVAAAQYNIAANHIDN. VQIIRMAAEEFTQAMNG
Query Conservation 
   
          



 

 
  

 

   .  
 


    

  
  
   
 
 
.                 
Alig confidence 

...




























.


























.











.....
Template Conservation    ...       
  


   
 
   
  
      
  

    
      
   
     
     
     .....
Template Sequence  VR. . . MAKVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP. . . . .
Template Known Secondary structure  ...TTT

TT
TT
TTTTTT


S
TT
TTT
S
GGG

.....
Template Predicted Secondary structure  ...
























.....
Template SS confidence 















































































   117. .120.........130.........140.........150.........160.........170.........180........
 
   277..280.........290.........300.........310.. .......320..... ....330.........340.....
Predicted Secondary structure 























.




..........



Query SS confidence 



































.












. . . . . . . . . .



















Query Sequence  VREFNRLQGIDLKSYQCETIFVDPPRSGLDSETEKM. VQAYPRILYISCN. . . . . . . . . . PETLCKNLETLSQTHKVERL
Query Conservation                   
  
 



 
        .      





 ..........
 

 


  
   
     
Alig confidence  ............























.












..........



















Template Conservation  ............     
 


  
      
  
   




 
 
              
         
  


   
Template Sequence  . . . . . . . . . . . . GENIADRILMGYVVRTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKLNE
Template Known Secondary structure  ............

S



SSGGGG

BGGGTTTTTTTT
Template Predicted Secondary structure  ............


























Template SS confidence 















































































   189190.........200.........210.........220.........230.........240.........250......
 
   346.. .350.........360.....
Predicted Secondary structure  .






Query SS confidence 


.
















Query Sequence  ALF. DQFPYTHHMECGVLLTA
Query Conservation     .
 

 
 


 
  
 
Alig confidence 


.
















Template Conservation    

 
 
   

  
     
Template Sequence  LKIKRYAPGVWHVVLDLRVFK
Template Known Secondary structure 
S
BTTTB


Template Predicted Secondary structure 




Template SS confidence 




















   257..260.........270.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions