Job Description P23003 Confidence 99.37% Date Wed Jan 25 15:20:43 GMT 2012 Rank 68 Aligned Residues 108 % Identity 20% Template c2r6zA_ PDB info PDB header:transferase Chain: A: PDB Molecule:upf0341 protein in rsp 3' region; PDBTitle: crystal structure of the sam-dependent methyltransferase2 ngo1261 from neisseria gonorrhoeae, northeast structural3 genomics consortium target ngr48 Resolution 1.80 Å

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		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.								.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.																	.
Query SS confidence																																										.	.	.	.	.	.	.																	.
Query Sequence		W	A	L	D	V	T	K	G	S	K	G	D	L	L	E	L	Y	C	G	N	G	N	F	S	L	A	L	A	R	N	F	D	R	V	L	A	T	E	I	A	.	.	.	.	.	.	.	K	P	S	V	A	A	A	Q	Y	N	I	A	A	N	H	I	.	D	N	V	Q	I	I	R	M	A	A	E	E	F	T	Q	A
Query Conservation																																										.	.	.	.	.	.	.																	.
Alig confidence																																										.	.	.	.	.	.	.																	.
Template Conservation
Template Sequence		I	A	K	A	V	N	H	T	A	H	P	T	V	W	D	A	T	A	G	L	G	R	D	S	F	V	L	A	S	L	G	L	T	V	T	A	F	E	Q	H	P	A	V	A	C	L	L	S	D	G	I	R	R	A	L	L	N	P	E	T	Q	D	T	A	A	R	I	N	L	H	F	G	N	A	A	E	Q	X	P	A
Template Known Secondary structure						T	T	G	G	G							T	T		T	T										T	T																										S								T	T						S
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.										.	.	.	310	.	.	.	.	.			.	.	.	.	320	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.										.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.										.	.
Query Sequence		M	N	G	V	R	E	F	N	R	L	Q	G	I	D	L	K	S	Y	Q	C	E	T	I	F	V	D	P	P	R	S	G	L	D	.	.	.	.	.	.	.	.	.	S	E	T	E	K	M	V	Q	A	.	.	Y	P	R	I	L	Y
Query Conservation																																			.	.	.	.	.	.	.	.	.										.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.										.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	K	.	.	.	.	.	.	.	.	.	.	.	.	T	Q	G	K	P	D	I	V	Y	L	D	P	X	X	A	Y	F	H	R	L	V	G	E	A	Q	D	E	V	V	L	L	H	T	A	R	Q	T	A	K	K	R	V	V	V
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.						S																S																	S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		155	.	.													.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions