|   |
43 | . | . | . | . | . | . | 50 | . | . | |
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | |
|
|
|
. | . | . | 100 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | 110 |
Predicted Secondary structure |   |
|
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|  |  |  |
| . |
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|
|  |  |  |  |
|  |  |  |  |
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|  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . |
|
|
|  |  |  |  |  |  |
|
| . | . | . | . | . | . | . |
|  |  |
Query SS confidence |   |
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| . |
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| . |
. |
. |
. |
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|
| . |
. |
. |
. |
. |
. |
. |
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|
|
Query Sequence |   |
K | P | V | P | K | F | R | L | E | S | . |
L | D | N | P | G | Q | F | Y | Q | A | D | V | L | T | Q | G | K | P | V | L | L | N | V | W | A | T | W | C | P | T | C | R | A | E | H | Q | Y | L | N | Q | L | S | A | Q | . |
. |
. |
. |
G | I | R | V | V | G | M | N | Y | K | D | . |
. |
. |
. |
. |
. |
. |
D | R | Q |
Query Conservation |   |
  |   |   |
|   |
|   |
|   |   | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
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|   |
|   |
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|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |
|   |
|   |   |   |   | . | . | . | . | . | . | . |   |   |   |
Alig confidence |   |
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|
| . |
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| . | . | . |
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| . | . | . | . |
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|
| . | . | . | . | . | . | . |
|
|
|
Template Conservation |   |
  |
|   |   |
|
|   |
|   |
|   |   |   |
|   |   |
|
|
|   |
| . | . | . |   |
|
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|   |
|   |   |
|   |
|
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
Q | S | V | Y | A | F | S | A | R | P | L | A | G | G | E | P | V | S | L | G | S | . |
. |
. |
L | R | G | K | V | L | L | I | E | N | V | A | S | L | G | G | T | T | V | R | D | Y | T | Q | M | N | E | L | Q | R | R | L | G | P | R | G | L | V | V | L | G | F | P | C | N | Q | F | G | H | Q | E | N | A | K | N | E |
Template Known Secondary structure |   |
|
| G | G | G |
|  |  |
| B | T | T |
| S | S |
|  |  | G | G | G | . | . | . | G | T | T | S |  |  |  |  |  |  |  |
| S | S | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | T |  |  |  |  |  |  |  |
|
|
| S | T | T | T | T |
| S |
|  |  |
Template Predicted Secondary structure |   |
|
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|
|  |  |  |  |  |
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|
|  |  |  |
|  |  |  | . | . | . |  |
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|
|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |
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|  |  |
Template SS confidence |   |
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  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | |
|
|
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
  |
  |   |
111 | . | . | . | . | . | . | . | . | |
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120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
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|
|  |  |  |  |  |  |  |
|
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|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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. |
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|
Query Sequence |   |
K | A | I | S | W | L | K | E | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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. |
G | N | P | Y | A | L | S | L | F | D | G | D | G | M | L | G | L | D | L | G | V | Y | G | A | P | E | T | F | L | I | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|
|
|
|
Template Sequence |   |
E | I | L | N | S | L | K | Y | V | R | P | G | G | G | F | E | P | N | F | M | L | F | E | K | C | E | V | N | G | A | G | A | H | P | L | F | A | F | L | R | E | A | L | P | A | P | S | D | D | A | T | A | L | M | T | D | P | K | L | I | T | W | S | P | V | C | R | N | D | V | A | W | N | F | E | K | F | L | V | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | S | S |
| T | T |
|
|
| S | S |  |  | B |
|
|
|
|
| S | S | T | T |
|
|  |  |  |  |  |  |  |  |  | S |
| S |
| T | T |
| S | S |
|
|
| S | S | G | G | G |
|
| S | S | S |
|
| T | T |
|
|
| S | T | T |
|  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
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|
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|
  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . |
  |
  |   |
151 | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
Query Sequence |   |
G | N | G | I | I | R | Y | R | H | A | G | D | L | N | P | R | V | W | E | E | E | I | K | P | L | W |
Query Conservation |   |
  |   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
Template Sequence |   |
P | D | G | V | P | L | R | R | Y | S | R | R | F | Q | T | I | D | I | E | P | D | I | E | A | L | L |
Template Known Secondary structure |   |
T | T | S |
|  |  |  |  |  |
| T | T | S |
| G | G | G | G |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
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|
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|
|
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|
|
|
|
|
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|
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|
  |   |
169 | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . |
  |