Job Description P0AA86 Confidence 97.74% Date Thu Jan 5 11:12:11 GMT 2012 Rank 240 Aligned Residues 107 % Identity 15% Template c3ghaA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:disulfide bond formation protein d; PDBTitle: crystal structure of etda-treated bdbd (reduced) Resolution 1.40 Å

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.					.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																								.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	Q	G	K	P	V	L	L	N	V	W	A	T	W	C	P	T	C	R	A	E	H	.	.	.	.	Q	Y	L	N	Q	L	S	A	Q	G	I	R	V	V	G	M	N	Y	K	D	D	R	Q	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																								.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	D	A	P	V	T	V	V	E	F	G	D	Y	K	C	P	S	C	K	V	F	N	S	D	I	F	P	K	I	Q	K	D	F	I	D	K	G	D	V	K	F	S	F	V	N	V	M	F	H	G	K	G	S	R	L	A	A	L	A	S	E	E	V	W	K	E	D	P	D	S	F	W	D	F	H	E	K	L	F	E
Template Known Secondary structure		T	T		S									T	T											T								T	T	T	T	T	S											S																			G	G	G
Template Predicted Secondary structure
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
																													113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	W	L	K	E	L	G	N	P	Y	A	L	S	L	F	D	G	D	G	M	L	G	L	D	L	G	V	Y	G	A	P	E	T	F	L	I	D	G	N	G	I	I	R	Y	R	H	A	G	D	L	N	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.					.	.	.
Template Conservation																																																																	.	.	.					.	.	.
Template Sequence		K	Q	P	D	T	E	Q	E	W	V	T	P	G	L	L	G	D	L	A	K	S	T	T	K	I	K	P	E	T	L	K	E	N	L	D	K	E	T	F	A	S	Q	V	E	K	D	S	D	L	N	Q	K	M	N	I	Q	A	T	P	T	I	Y	V	.	.	.	N	D	K	V	.	.	.	I	K	N	F	A	D	Y
Template Known Secondary structure					S	S	S	S																S	S	S												T	T	T														T	T			S	S						.	.	.	T	T			.	.	.		S		T	T
Template Predicted Secondary structure																																																																	.	.	.					.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.				.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	W	E	E	E	I	K	P	L	W	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	I	K	E	T	I	E	K	E	L	K	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions