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Job DescriptionP0AA86
Confidence99.83%DateThu Jan 5 11:12:11 GMT 2012
Rank53Aligned Residues134
% Identity22%Templatec2he3A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glutathione peroxidase 2; PDBTitle: crystal structure of the selenocysteine to cysteine mutant of human2 glutathionine peroxidase 2 (gpx2)
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70.........80.........90....... ..100.........110
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Query Sequence  IGKPVPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQG. . . . IRVVGMNYKDDRQ. . . . . .
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Template Sequence  IAKSFYDLSAINLDGEKVDFNT. . . FRGRAVLIENVASLCGTTTRDFTQLNELQCRFPRRLVVLGFPCNQFGHQENCQNE
Template Known Secondary structure 

SSGGG
BTTS
GGG...GTTS
TTSTTSTTTB

STT


S
GG
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   4.....10.........20..... ....30.........40.........50.........60.........70.........80
 
   111........120...... ...130.........140.........150
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Query Sequence  . . . . . . KAISWLKELGNPYALS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LFDGDGMLGLDLGVYGAPETFLID
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Template Sequence  EILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFAYLKDKLPYPYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLIG
Template Known Secondary structure  GTSS
TT


SSB

BBSSSTTB
S
S
TT
SS


SSGGG


SS

TT


STT

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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   151........160.........170.......
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Query Sequence  GNGIIRYRHAGDLNPRVWEEEIKPLWE
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Template Sequence  PEGEPFRRYSRTFPTINIEPDIKRLLK
Template Known Secondary structure  TTS

TTS
GGGG
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   161........170.........180.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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