Job Description P0AA86 Confidence 99.46% Date Thu Jan 5 11:12:11 GMT 2012 Rank 133 Aligned Residues 106 % Identity 18% Template c2f51B_ PDB info PDB header:electron transport Chain: B: PDB Molecule:thioredoxin; PDBTitle: structure of trichomonas vaginalis thioredoxin Resolution 1.90 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	E	S	L	D	N	P	G	Q	F	Y	Q	A	D	V	L	T	Q	G	K	P	V	L	L	N	V	W	A	T	W	C	P	T	C	R	A	E	H	Q	Y	L	N	Q	L	S	A	Q	G	I	R	V	V	G	M	N	Y	K	D	D	R	Q	K	A	I	S	W	L	K	E	L	G	N	P	Y	A	L	S	L	F
Query Conservation
Alig confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	I	V	H	F	N	G	T	H	E	A	L	L	N	R	I	K	E	A	P	G	L	V	L	V	D	F	F	A	T	W	C	G	P	C	Q	R	L	G	Q	I	L	P	S	I	A	E	A	N	K	D	V	T	F	I	K	V	D	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								S													S	S									T	T																			T	T	S							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		D	G	D	G	M	L	G	L	D	L	G	V	Y	G	A	P	E	T	F	L	I	D	G	N	G	I	I	R	Y	R	H	A	G	D	L	.	.	N	P	R	V	W	E	E	E	I	K	P	L
Query Conservation																																					.	.
Alig confidence		.																																			.	.
Template Conservation		.
Template Sequence		.	K	N	G	N	A	A	D	A	Y	G	V	S	S	I	P	A	L	F	F	V	K	K	E	G	N	E	I	K	T	L	D	Q	F	V	G	A	D	V	S	R	I	K	A	D	I	E	K	F
Template Known Secondary structure		.	T								T	T			S	S	S									T	T										S
Template Predicted Secondary structure		.
Template SS confidence
			64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions