|   |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
|
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
. | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | |
|
|
|
. | . | . | 100 | . | . | . | . | . | . | . | . | . | |
|
|
Predicted Secondary structure |   |
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|
|  |  |  |
|
|
|
|
|  | . | . |  |  |  |
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
| . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|  | . | . | . |
Query SS confidence |   |
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
| . |
. |
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|
| . |
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|
| . |
. |
. |
. |
|
|
|
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|
|
|
|
|
|
|
| . |
. |
. |
Query Sequence |   |
L | I | G | K | P | V | P | K | F | R | L | E | S | L | D | N | P | G | . |
. |
Q | F | Y | Q | A | D | V | L | T | Q | G | K | P | V | L | L | N | V | W | . |
A | T | W | C | P | T | C | R | A | E | H | Q | Y | L | N | Q | L | S | A | Q | . |
. |
. |
. |
G | I | R | V | V | G | M | N | Y | K | D | D | R | . |
. |
. |
Query Conservation |   |
  |   |
|   |   |   |
|   |
|   |
|   |   |   |   |
|   |   | . | . |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |
|   | . |
|
|
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |
|   |
|   |   |   |   |   |   | . | . | . |
Alig confidence |   |
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|
| . | . |
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| . |
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|
| . | . | . | . |
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|
|
| . | . | . |
Template Conservation |   |
|
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|   |   |
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|   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |
|
|   |   |
|
|
|   |
|   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |
|   |   |   |   |   |   |
Template Sequence |   |
L | V | T | K | K | A | Y | N | F | T | A | Q | G | L | N | K | N | N | E | I | I | N | V | D | L | S | S | F | I | G | Q | K | Y | C | C | L | L | F | Y | P | L | N | Y | T | F | V | C | P | T | E | I | I | E | F | N | K | H | I | K | D | F | E | N | K | N | V | E | L | L | G | I | S | V | D | S | V | Y | S | H | L |
Template Known Secondary structure |   |
| T | T | S | B |
|
|
|
|  |  |  |  |  |
| T | T | S |
|  |  |  |  |  | G | G | G | G | T | T | T |
|  |  |  |  |  |  |
|
|
|
| T | T | T |
|
|  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | S | S |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
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|
|  |  |  |
|
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|
|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |
Template SS confidence |   |
|
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  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
  |
  |   |
|
|
|
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . |
Predicted Secondary structure |   |
. | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
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|
|
|
|
|
|
|  |  |  |  |  |  |  |
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|
|
| . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
|
|
|
|
|
|
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|
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| . |
. |
. |
. |
. |
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|
Query Sequence |   |
. |
. |
. |
Q | K | A | I | S | W | L | K | E | L | G | N | P | Y | A | L | S | L | F | D | G | D | G | M | L | G | L | D | L | G | V | Y | G | . |
. |
. |
. |
. |
A | P | E | T | F | L | I | D | G | N | G | I | I | R | Y | R | H | A | G | D | L | N | P | R | V | W | E | E | E | I | K | P | L | W | E | K | Y | S | K |
Query Conservation |   |
. | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   | . | . | . | . | . |   |
|   |   |   |
|
|
|   |   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
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|
| . | . | . | . | . |
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|
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|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |
|   |
|   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |   |
|   |   |
Template Sequence |   |
A | W | K | N | M | P | I | E | K | G | G | I | G | N | V | E | F | T | L | . |
V | S | D | I | N | K | D | I | S | K | N | Y | N | V | L | Y | D | N | S | F | A | L | R | G | L | F | I | I | D | K | N | G | C | V | R | H | Q | T | V | N | D | L | P | I | G | R | N | V | Q | E | V | L | R | T | I | D | S | I | I | H |
Template Known Secondary structure |   |
 |  |  |  | S |
| G | G | G | T |
|
|
| S |
| S | S |  |  | . |  |  |
| T | T | S |  |  |  |  |  | T | T |
|  |  | T | T | T |  |  |
|  |  |  |  |  |  |
| T | T | S | B |  |  |  |  |  |  |  |
| T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
101 | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | |
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
  |
  |   |
182 |
Predicted Secondary structure |   |
|
Query SS confidence |   |
|
Query Sequence |   |
E |
Query Conservation |   |
  |
Alig confidence |   |
|
Template Conservation |   |
  |
Template Sequence |   |
V |
Template Known Secondary structure |   |
 |
Template Predicted Secondary structure |   |
 |
Template SS confidence |   |
|
  |   |
180 |
  |