Job Description P0AA86 Confidence 98.88% Date Thu Jan 5 11:12:11 GMT 2012 Rank 199 Aligned Residues 121 % Identity 19% Template c1nm3B_ PDB info PDB header:electron transport Chain: B: PDB Molecule:protein hi0572; PDBTitle: crystal structure of heamophilus influenza hybrid-prx5 Resolution 2.80 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																					.																				.											.											.	.	.	.
Query SS confidence																					.																				.											.											.	.	.	.
Query Sequence		A	L	I	G	K	P	V	P	K	F	R	L	E	S	L	D	N	P	G	.	Q	F	Y	Q	A	D	V	L	T	Q	G	K	P	V	L	L	N	V	W	.	A	T	W	C	P	T	C	R	A	E	.	H	Q	Y	L	N	Q	L	S	A	Q	.	.	.	.	G	I	R	V	V	G	M	N	Y	K	D	D	R	Q	K
Query Conservation																					.																				.											.											.	.	.	.
Alig confidence																					.																				.											.											.	.	.	.
Template Conservation
Template Sequence		S	X	E	G	K	K	V	P	Q	V	T	F	R	T	R	Q	G	D	K	W	V	D	V	T	T	S	E	L	F	D	N	K	T	V	I	V	F	S	L	P	G	A	F	T	P	T	C	S	S	S	H	L	P	R	Y	N	E	L	A	P	V	F	K	K	Y	G	V	D	D	I	L	V	V	S	V	N	D	T	F	V
Template Known Secondary structure				T	T	S	B											T	T												T	T	S								S		T	T	S			S	S	T	T															T	T									S	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140												.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	S	W	L	K	E	L	G	N	P	Y	A	L	S	L	F	D	G	D	G	M	L	G	L	D	L	G	V	.	.	.	.	.	.	.	.	.	.	.	Y	G	A	P	E	T	F	L	I	D	G	N	G	I	I	R	Y	R	H	A
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																																																				.
Template Sequence		X	N	A	W	K	E	D	E	K	S	E	N	I	S	F	I	P	D	G	N	G	E	F	T	E	G	X	G	X	L	V	G	K	E	D	L	G	F	G	K	R	S	W	R	Y	S	X	L	V	K	.	N	G	V	V	E	K	X	F	I
Template Known Secondary structure										T		T	T	S						T	T	S						T	T						T	T	T	T							S							.	T	T
Template Predicted Secondary structure																																																				.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions