Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFS3
Confidence100.00%DateThu Jan 5 11:27:08 GMT 2012
Rank72Aligned Residues239
% Identity22%Templated1zk4a1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........
Predicted Secondary structure 




































..
Query SS confidence 













































































. .
Query Sequence  GKTQPLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAIDGLINAGAQCIQADFSTNDGVMAFADEVLKSTHGL. .
Query Conservation    
 

 






 


 


  

  

 
 
  
                                         ..
Alig confidence 













































































..
Template Conservation    
 

 










 
 
  

  

 

   
                       
                   
Template Sequence  NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFG
Template Known Secondary structure 
TTTT
TTTTSTT
S


TTT

TT
S
Template Predicted Secondary structure 




































Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   80.........90.........100.........110.........120.........130.........140.........150........
Predicted Secondary structure  .






















































Query SS confidence  .














































































Query Sequence  . RAILHNASAWMAEKPGAPLADVLACMMQIHVNTPYLLNHALERLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAA
Query Conservation  .                                                          

            
 


  
Alig confidence  .














































































Template Conservation                                                              
               
   
Template Sequence  PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGA
Template Known Secondary structure  S










TTT

TTTSSS


GGGTS

TT
Template Predicted Secondary structure 


























































Template SS confidence 















































































   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   159160.........170. ........180.........190. ........200.........210.........220.. .......230
Predicted Secondary structure 
...















...








..






Query SS confidence 












. . .



















. . .






























. .







Query Sequence  LDNMTRSFARKLA. . . PEVKVNSIAPSLILFNEHDD. . . AEYRQQALNKSLMKTAPGEKEVIDLVDYLLT. . SCFVTGRS
Query Conservation          
 
  ...  
 

 
 

 
 
     ...           
  
   
 


  
  
 
..   


  
Alig confidence 












...



















...






























..







Template Conservation          
         
 
  
 

   
                   
  
   




  
  
 
  
  


  
Template Sequence  VRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSE
Template Known Secondary structure  TT
S

B

TSTTTSTTT
TTSS
B
SGGGTT

S
Template Predicted Secondary structure 

































Template SS confidence 















































































   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   231........240
Predicted Secondary structure 






Query SS confidence 









Query Sequence  FPLDGGRHLR
Query Conservation 
 



  

Alig confidence 









Template Conservation 
 



 

 
Template Sequence  FVVDGGYTAQ
Template Known Secondary structure  STTGGG
Template Predicted Secondary structure 






Template SS confidence 









   242.......250.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions