Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFS3
Confidence100.00%DateThu Jan 5 11:27:08 GMT 2012
Rank16Aligned Residues238
% Identity15%Templated1hdca_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  GKTQPLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAIDGLINAGAQCIQADFSTNDGVMAFADEVLKSTHGLRA
Query Conservation    
 

 






 


 


  

  

 
 
  
                                           
Alig confidence 















































































Template Conservation   

 

 






 


 


  

  
  

   
                                           
Template Sequence  NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSV
Template Known Secondary structure 




STTTSTT
S
TTGGG

TT
S

Template Predicted Secondary structure 













































Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 




















































Query SS confidence 















































































Query Sequence  ILHNASAWMAEKPGAPLADVLACMMQIHVNTPYLLNHALERLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALDN
Query Conservation                                                          

            
 


     
Alig confidence 















































































Template Conservation                                                           
            
  

 
   
Template Sequence  DGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRG
Template Known Secondary structure 







S
GGGS
TT


GGGTS

TT
Template Predicted Secondary structure 





















































Template SS confidence 















































































   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   162....... 170.........180......... 190.........200.........210.........220.. .......230......
Predicted Secondary structure 
.













..










..









Query SS confidence 







.



















. .
































. .













Query Sequence  MTRSFARK. LAPEVKVNSIAPSLILFNEH. . DDAEYRQQALNKSLMKTAPGEKEVIDLVDYLLT. . SCFVTGRSFPLDGG
Query Conservation       
 
.    
 

 
 

 
 
   ..             
  
   
 


  
  
 
..   


  
 



Alig confidence 







.



















..
































..













Template Conservation       
       



 
 

 
 
                  
  
   




     
 
  
  


  
 



Template Sequence  LSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGEPGEIAGAVVKLLSDTSSYVTGAELAVDGG
Template Known Secondary structure  GGGT
SB

T


STTS
TTSTTSS
B
SGGGTT

S
STT
Template Predicted Secondary structure 



































Template SS confidence 















































































   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   237..
Predicted Secondary structure 


Query SS confidence 


Query Sequence  RHL
Query Conservation    
Alig confidence 


Template Conservation     
Template Sequence  WTT
Template Known Secondary structure  TTT
Template Predicted Secondary structure 


Template SS confidence 


   243..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions