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Job DescriptionP0AFS3
Confidence100.00%DateThu Jan 5 11:27:08 GMT 2012
Rank117Aligned Residues232
% Identity23%Templatec3v8bC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:putative dehydrogenase, possibly 3-oxoacyl-[acyl-carrier PDBTitle: crystal structure of a 3-ketoacyl-acp reductase from sinorhizobium2 meliloti 1021
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50. ........60.........70.........80..
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Query Sequence  PILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAIDGLINAG. . . . . AQCIQADFSTNDGVMAFADEVLKSTHGLRAI
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Template Sequence  VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQXRNAVRDLVLKFGHLDIV
Template Known Secondary structure  STTSTT
SSTTS


TT
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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   83... ...90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  LHNA. SAWMAEKPGAPLADVLACMMQIHVNTPYLLNHALERLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALDN
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Template Sequence  VANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVA
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TTTS
TTT


SBTTTB

STT
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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   162.......170... ......180.........190.........200. ........210.........220.. .....
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Query Sequence  MTRSFARKLAPE. VKVNSIAPSLILFNEHDDAEYRQQALNK. . . . . . . . . . . SLMKTAPGEKEVIDLVDYLLT. . SCFVT
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Template Sequence  IVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERARHVT
Template Known Secondary structure  GGGTS
BSS
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TT


S




TT
S
GGGTTS
B
TSGGGTT

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   167..170.........180.........190.........200.........210.........220.........230.........240......
 
   228.230.........
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Query Sequence  GRSFPLDGGRHL
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Template Sequence  GSPVWIDGGQGL
Template Known Secondary structure  S
STT
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   247..250........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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