Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFS3
Confidence100.00%DateThu Jan 5 11:27:08 GMT 2012
Rank71Aligned Residues232
% Identity18%Templatec3sjuA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:keto reductase; PDBTitle: hedamycin polyketide ketoreductase bound to nadph
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.. .......60.........70.........80.
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Query Sequence  LPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAIDGLINAGA. . . . . QCIQADFSTNDGVMAFADEVLKSTHGLRA
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Template Sequence  QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGI
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   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  ILHNASAWMAEKPGAPLADVLACMMQIHVNTPYLLNHALERLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALDN
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Template Sequence  LVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVG
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   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   162....... 170.........180......... 190.........200.........210.........220.. ...
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Query Sequence  MTRSFARK. LAPEVKVNSIAPSLILFNEH. . . . . . . . . . . . . DDAEYRQQALNKSLMKTAPGEKEVIDLVDYLLT. . SCF
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Template Sequence  FTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTDAAAS
Template Known Secondary structure  TGGGTSSB
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   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   226...230........
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Query Sequence  VTGRSFPLDGGRH
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Template Sequence  ITAQALNVCGGLG
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   245....250.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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