Job Description P0AFS3 Confidence 100.00% Date Thu Jan 5 11:27:08 GMT 2012 Rank 89 Aligned Residues 232 % Identity 18% Template c3r1iB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:short-chain type dehydrogenase/reductase; PDBTitle: crystal structure of a short-chain type dehydrogenase/reductase from2 mycobacterium marinum Resolution 1.95 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	K	T	Q	P	L	P	I	L	I	T	G	G	G	R	R	I	G	L	A	L	A	W	H	F	I	N	Q	K	Q	P	V	I	V	S	Y	R	T	H	Y	P	A	I	D	G	L	I	N	A	G	A	Q	C	I	Q	A	D	F	S	T	N	D	G	V	M	A	F	A	D	E	V	L	K	S	T	H	G	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	F	D	L	S	G	K	R	A	L	I	T	G	A	S	T	G	I	G	K	K	V	A	L	A	Y	A	E	A	G	A	Q	V	A	V	A	A	R	H	S	D	A	L	Q	V	V	A	D	E	I	A	G	V	G	G	K	A	L	P	I	R	C	D	V	T	Q	P	D	Q	V	R	G	M	L	D	Q	M	T	G	E
Template Known Secondary structure		G	G			T	T						S	S	T	T	S													T	T								S	S	G	G	G	G										T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
						81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure		.	.	.	.																																																																	.	.
Query SS confidence		.	.	.	.																																																																	.	.
Query Sequence		.	.	.	.	A	I	L	H	N	A	S	A	W	M	A	E	K	P	G	A	P	L	A	D	V	L	A	C	M	M	Q	I	H	V	N	T	P	Y	L	L	N	H	A	L	E	R	L	L	R	G	H	G	H	A	A	S	D	I	I	H	F	T	D	Y	V	V	E	R	.	.	G	S	D	K	H	I	A	Y	A	A
Query Conservation		.	.	.	.																																																																	.	.
Alig confidence		.	.	.	.																																																																	.	.
Template Conservation
Template Sequence		L	G	G	I	D	I	A	V	C	N	A	G	I	V	S	V	Q	A	M	L	D	M	P	L	E	E	F	Q	R	I	Q	D	T	N	V	T	G	V	F	L	T	A	Q	A	A	A	R	A	M	V	D	Q	G	L	G	G	T	I	I	T	T	A	S	M	S	G	H	I	I	N	I	P	Q	Q	V	S	H	Y	C	T
Template Known Secondary structure			S			S														G	G	G														T																		T	S										G	G	G	T	S				S	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.
Predicted Secondary structure																	.																																																						.	.
Query SS confidence																	.																																																						.	.
Query Sequence		S	K	A	A	L	D	N	M	T	R	S	F	A	R	K	.	L	A	P	E	V	K	V	N	S	I	A	P	S	L	I	L	F	N	E	H	D	D	A	E	Y	R	Q	Q	A	L	N	K	S	L	M	K	T	A	P	G	E	K	E	V	I	D	L	V	D	Y	L	L	T	.	.	S	C	F	V	T	G	R	S	F
Query Conservation																	.																																																						.	.
Alig confidence																	.																				.	.	.	.	.	.	.																												.	.
Template Conservation																																					.	.	.	.	.	.	.
Template Sequence		S	K	A	A	V	V	H	L	T	K	A	M	A	V	E	L	A	P	H	Q	I	R	V	N	S	V	S	P	G	Y	I	R	T	Y	H	.	.	.	.	.	.	.	A	L	W	E	P	K	I	P	L	G	R	M	G	R	P	E	E	L	T	G	L	Y	L	Y	L	A	S	A	A	S	S	Y	M	T	G	S	D	I
Template Known Secondary structure																		G	G	G	T											B					.	.	.	.	.	.	.				G	G	G	S	T	T	S	S		B		G	G	G	T									S	G	G	G	T	T			S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200								.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	D	G	G	R	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	D	G	G	Y	T	C
Template Known Secondary structure				S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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