Job Description P0AFS3 Confidence 100.00% Date Thu Jan 5 11:27:08 GMT 2012 Rank 22 Aligned Residues 239 % Identity 18% Template c3pk0B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:short-chain dehydrogenase/reductase sdr; PDBTitle: crystal structure of short-chain dehydrogenase/reductase sdr from2 mycobacterium smegmatis Resolution 1.75 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.						.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.
Query Sequence		M	G	K	T	Q	P	L	P	I	L	I	T	G	G	G	R	R	I	G	L	A	L	A	W	H	F	I	N	Q	K	Q	P	V	I	V	S	Y	R	T	H	Y	P	A	I	D	G	L	I	N	A	G	A	Q	C	I	Q	A	D	F	S	T	N	D	G	V	M	A	F	A	D	E	.	.	.	.	.	V	L	K	S
Query Conservation																																																																									.	.	.	.	.
Alig confidence																																																																									.	.	.	.	.
Template Conservation
Template Sequence		M	F	D	L	Q	G	R	S	V	V	V	T	G	G	T	K	G	I	G	R	G	I	A	T	V	F	A	R	A	G	A	N	V	A	V	A	G	R	S	T	A	D	I	D	A	C	V	A	D	L	D	Q	L	G	S	G	K	V	I	G	V	Q	T	D	V	S	D	R	A	Q	C	D	A	L	A	G	R	A	V	E
Template Known Secondary structure		T	T			T	T						T	T		S	S													T	T								S														T	T	S	S	S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	G	L	R	A	I	L	H	N	A	S	A	W	M	A	E	K	P	G	A	P	L	A	D	V	L	A	C	M	M	Q	I	H	V	N	T	P	Y	L	L	N	H	A	L	E	R	L	L	R	G	H	G	H	A	A	S	D	I	I	H	F	T	D	Y	V	V	E	R	G	S	D	K	H	I	A	Y	A	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	G	G	I	D	V	V	C	A	N	A	G	V	F	P	D	A	P	L	A	T	M	T	P	E	Q	L	N	G	I	F	A	V	N	V	N	G	T	F	Y	A	V	Q	A	C	L	D	A	L	I	A	S	G	S	G	R	V	V	L	T	S	S	I	T	G	P	I	T	G	Y	P	G	W	S	H	Y	G	A	T
Template Known Secondary structure				S			S														T	T	T														T																		S	S									S	B	T	T	T	B			T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230
Predicted Secondary structure																				.																	.	.																																		.	.
Query SS confidence																				.																	.	.																																		.	.
Query Sequence		K	A	A	L	D	N	M	T	R	S	F	A	R	K	L	A	P	E	.	V	K	V	N	S	I	A	P	S	L	I	L	F	N	E	H	.	.	D	D	A	E	Y	R	Q	Q	A	L	N	K	S	L	M	K	T	A	P	G	E	K	E	V	I	D	L	V	D	Y	L	L	T	.	.	S	C	F	V	T	G	R	S
Query Conservation																				.																	.	.																																		.	.
Alig confidence																				.																	.	.																																		.	.
Template Conservation
Template Sequence		K	A	A	Q	L	G	F	M	R	T	A	A	I	E	L	A	P	H	K	I	T	V	N	A	I	M	P	G	N	I	M	T	E	G	L	L	E	N	G	E	E	Y	I	A	S	M	A	R	S	I	P	A	G	A	L	G	T	P	E	D	I	G	H	L	A	A	F	L	A	T	K	E	A	G	Y	I	T	G	Q	A
Template Known Secondary structure																	G	G	G	T										S	B							T	T										T	T	S	T	T	S	S		B														S	G	G	G	T	T			S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		231	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	L	D	G	G	R	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	V	D	G	G	Q	V	L
Template Known Secondary structure					S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions