Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFS3
Confidence100.00%DateThu Jan 5 11:27:08 GMT 2012
Rank94Aligned Residues238
% Identity18%Templatec3pgxB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:carveol dehydrogenase; PDBTitle: crystal structure of a putative carveol dehydrogenase from2 mycobacterium paratuberculosis bound to nicotinamide adenine3 dinucleotide
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40... ......50.........60....
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Query Sequence  GKTQPLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPA. . . . . . . . . . . . . . . . . IDGLINAGAQCIQADFSTNDG
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Template Sequence  GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDA
Template Known Secondary structure 
TTTT
STTSTT


S


TT

S



TTT



TT
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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   65....70.........80.........90.........100.........110.........120.........130.........140....
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Query Sequence  VMAFADEVLKSTHGLRAILHNASAWMAEKPGAPLADVLACMMQIHVNTPYLLNHALERLLRGHGHAASDIIHFTDYVVER
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Template Sequence  ALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK
Template Known Secondary structure  S









B
GGG

T
S


GGGTS
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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   145....150.........160.........170... ......180.........190.........200 .........210..
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Query Sequence  GSDKHIAYAASKAALDNMTRSFARKLAPE. VKVNSIAPSLILFNEHDDAEYRQQALN. . . . . . . . . . . KSLMKTAPGEKE
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Template Sequence  ATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTADE
Template Known Secondary structure 

TTBGGGT
SB
SGGG
T
GGGGGGS

BTTB
SS
B
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   167..170.........180.........190.........200.........210.........220.........230.........240......
 
   213......220.. .......230.........
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Query Sequence  VIDLVDYLLT. . SCFVTGRSFPLDGGRHL
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Template Sequence  VADVVAWLAGDGSGTLTGTQIPVDKGALK
Template Known Secondary structure  SGGGTT
SS
STTGGG
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   247..250.........260.........270.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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