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Job DescriptionP0AFS3
Confidence100.00%DateThu Jan 5 11:27:08 GMT 2012
Rank53Aligned Residues236
% Identity19%Templatec3nugA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-oxoacyl-(acyl-carrier protein) reductase; PDBTitle: crystal structure of wild type tetrameric pyridoxal 4-dehydrogenase2 from mesorhizobium loti
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  GKTQPLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAIDGLINAGAQCIQADFSTNDGVMAFADEVLKSTHGLRA
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Template Sequence  ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGI
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TTTT
TTTTSTT


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Query Sequence  ILHNASAWMAEKPGAPLADVLACMMQIHVNTPY. LLNHALERLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALD
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Template Sequence  DILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVI
Template Known Secondary structure  S








GGG

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Query Sequence  NMTRSFARK. LAPEVKVNSIAPSLILFNEH. . . DDAEYRQQALNKSLMKTAPGEKEVIDLVDYLLT. . SCFVTGRSFPLD
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Template Sequence  GFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWITGQTLNVD
Template Known Secondary structure  GGGT
SB

TSGGGGGSSS
S
B
SGGGTT

S
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   235..
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Query Sequence  GGR
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Template Sequence  AGM
Template Known Secondary structure  TTS
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   243..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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