Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFS3
Confidence99.01%DateThu Jan 5 11:27:08 GMT 2012
Rank230Aligned Residues236
% Identity14%Templatec3lu1C_
PDB info PDB header:isomeraseChain: C: PDB Molecule:wbgu; PDBTitle: crystal structure analysis of wbgu: a udp-galnac 4-epimerase
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  TQPLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAIDGLINAGAQCIQADFSTNDGVMAFADEVLKSTHGLRAIL
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Template Sequence  FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVD
Template Known Secondary structure  S

TTTSTT

SSS

S
TT

TT
TTTT
S
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   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   84.....90.........100.........110.........120.........130......... 140.........150.........
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Query Sequence  HNASAWMAEKPGAPLADVLACMMQIHVNTPYLLNHALERLLRGHGHAASDIIHFTD. . . . YVVERGSDKHIAYAASKAAL
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Template Sequence  HVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVN
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TT
SGGGGTT


SSB
TT





S
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   94.....100.........110.........120.........130.........140.........150.........160.........170...
 
   160.........170... ......180.........190.........200........ .210.........220.. .
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Query Sequence  DNMTRSFARKLAPE. . VKVNSIAPSLILFNEHDDAEYRQQALNKSLMKTAP. . . . . . . . . . . . . GEKEVIDLVDYLLT. S
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Template Sequence  EIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAK
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SSTT



STT

T


S
S



T

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   174.....180.........190.........200.........210.........220.........230.........240.........250...
 
   224.....230.........
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Query Sequence  CFVTGRSFPLDGGRHL
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Template Conservation                  
Template Sequence  DSAKDNIYNVAVGDRT
Template Known Secondary structure  GGG
SS
S

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   254.....260.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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