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Job DescriptionP0AFS3
Confidence100.00%DateThu Jan 5 11:27:08 GMT 2012
Rank121Aligned Residues221
% Identity18%Templatec3llsB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:3-ketoacyl-(acyl-carrier-protein) reductase; PDBTitle: crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase from2 mycobacterium tuberculosis
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.. .......50.........60.........70...... ...80
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Query Sequence  TQPLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYP. . AIDGLINAGAQCIQADFSTNDGVMAFADEVLKST. HGLR
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Template Sequence  LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASKVGGTALWLDVTADDAVDKISEHLRDHHGGKAD
Template Known Secondary structure  TTT
S
SSTT

GGGT


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   211........220.........230.........240.........250.........260.........270.........280.........290
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  AILHNASAWMAEKPGAPLADVLACMMQIHVNTPYLLNHALERLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALD
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Template Sequence  ILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRLTEGLVGNGSI. . GEGGRVIGLSSIAGIAGNRGQTNYATTKAGMI
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B
GGG

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   291........300.........310.........320.........330...... ...340.........350.........360........
 
   161........170... ......180.........190.........200.........210.........220.. .......230.......
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Query Sequence  NMTRSFARKLAPE. VKVNSIAPSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIDLVDYLLT. . SCFVTGRSFPLDGGR
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Template Sequence  GITQALAPGLAAKGITINAVAPGFIERRL. . . . . . . . . . . . . NSLLQGGQPVDVAEAIAYFASPASNAVTGNVIRVCGQA
Template Known Secondary structure  TTT



S




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SGGGTT

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   369370.........380.........390....... ..400.........410.........420.........430.....
 
   238.
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Query Sequence  HL
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Template Sequence  MI
Template Known Secondary structure  S
Template Predicted Secondary structure 

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   451.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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