Job Description P0AFS3 Confidence 98.75% Date Thu Jan 5 11:27:08 GMT 2012 Rank 250 Aligned Residues 172 % Identity 13% Template c3ew7A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lmo0794 protein; PDBTitle: crystal structure of the lmo0794 protein from listeria2 monocytogenes. northeast structural genomics consortium3 target lmr162. Resolution 2.73 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	I	L	I	T	G	G	G	R	R	I	G	L	A	L	A	W	H	F	I	N	Q	K	Q	P	V	I	V	S	Y	R	T	H	Y	P	A	I	D	G	L	I	N	A	G	A	Q	C	I	Q	A	D	F	S	T	N	D	G	V	M	A	F	A	D	E	V	L	K	S	T	H	G	L	R	A	I	L	H	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	K	I	G	I	I	G	A	T	G	R	A	G	S	R	I	L	E	E	A	K	N	R	G	H	E	V	T	A	I	V	R	N	A	G	K	I	T	Q	T	H	K	D	I	N	I	L	Q	K	D	I	F	D	L	T	L	S	D	L	S	D	Q	N	V	V	V	D	A	Y	G	I	S	P	D	E	A	E	K	H	V
Template Known Secondary structure								T	T	T	S													T	T								S		S								S	S	S							G	G	G							T	T		S								S	S	T	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	W	M	A	E	K	P	G	A	P	L	A	D	V	L	A	C	M	M	Q	I	H	V	N	T	P	Y	L	L	N	H	A	L	E	R	L	L	R	G	H	G	H	A	A	S	D	I	I	H	F	T	D	Y	V	V	E	R	G	S	D	K	H	I	A	Y	A	A	S	K	A	A	L	D	N	M	T	R	S	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.																						.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.																						.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	L	D	H	L	I	S	V	L	N	G	T	V	S	P	R	L	L	V	V	G	G	A	A	.	.	.	A	P	Y	Y	P	T	A	R	A	Q	A	K	Q	L	E	H	L	K	S	H	Q	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S			S	S										.	.	.				S															T	T	T	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.																						.
Template SS confidence
																																81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.				.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	K	L	A	P	E	V	K	V	N	S	I	A	P	S	L	I	L	F	N	E	H	D	D	A	E	Y	R	Q	Q	A	L	N	K	S	L	M	K	T	A	P	G	E	K	E	V	I	D	L	V	D	Y	L	L	T	S	C	F	V	T	G	R	S	F	P	L	D	G
Query Conservation
Alig confidence		.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	A	E	F	S	W	T	Y	I	S	P	S	A	X	F	E	P	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	X	E	D	Y	A	I	A	V	L	D	E	I	E	R	P	N	H	L	N	E	H	F	T	V	A	G
Template Known Secondary structure		.	.	.	.	.	T	T	S								S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																S		S		T	T	S
Template Predicted Secondary structure		.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.																			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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