Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFS3
Confidence100.00%DateThu Jan 5 11:27:08 GMT 2012
Rank11Aligned Residues227
% Identity20%Templatec3diiB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:short-chain dehydrogenase/reductase sdr; PDBTitle: crystal structure of a carbohydrate specific scor enzyme2 from clostridium thermocellum, ligand-free form
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  PLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAIDGLINAGAQCIQADFSTNDGVMAFADEVLKSTHGLRAILHN
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Template Sequence  NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN
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STTSTT
S
TT
TT

TT
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  ASAWMAEKPGAPLADVLACMMQIHVNTPYLLNHALERLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALDNMTRS
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Template Sequence  NACGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELI. . . KNKGRIINIASTRAFQSEPDSEAYASAKGGIVALTHA
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GGGT

TT...T


GGGTS

TT
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   82.......90.........100.........110.........120. ........130.........140.........150........
 
   166...170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  FARKLAPEVKVNSIAPSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIDLVDYLLTSCFVTGRSFPLDGGRHLR
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Template Sequence  LAMSLGPDVLVNCIAPGWINVTEFT. . . . . QEDCAAIPAGKVGTPKDISNMVLFLCQQDFITGETIIVDGGMSKR
Template Known Secondary structure  TTTS
SB





.....TSTTSS
B
T
SS

S
STTGGG
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   160.........170.........180.... .....190.........200.........210.........220.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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