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Job DescriptionP0AFS3
Confidence98.50%DateThu Jan 5 11:27:08 GMT 2012
Rank271Aligned Residues183
% Identity13%Templatec2ydyA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:methionine adenosyltransferase 2 subunit beta; PDBTitle: crystal structure of human s-adenosylmethionine synthetase2 2, beta subunit in orthorhombic crystal form
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  PLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAIDGLINAGAQCIQADFSTNDGVMAFADEVLKSTHGLRAILHN
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Template Sequence  NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGVHHIIHDF. . . . . . . . . . QPHVIVHCAVDASGNLAKEAAAVGAFLIYI
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TTTSTTT


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S


T
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   28.30.........40.........50.........60....... ..70.........80.........90.......
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  ASAWMAEKPGAPLADVLACMMQIHVNTPYLLNHALERLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALDNMTRS
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Template Sequence  SSDYVFDGTNPPYRE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EDIPAPLNLYGKTKLDGEKAVLE
Template Known Secondary structure  GGGS
SSS
SB
T..........................................TS




S
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   135....140......... 150.........160.........170..
 
   166...170.........180.........190.........200.... .....210.........220.. .......230.....
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Query Sequence  FARKLAPEVKVNSIAPSLILFNEHDDAEYRQQALNKSLM. . . . . . . KTAPGEKEVIDLVDYLLT. . . SCFVTGRSFPLDG
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Template Sequence  NNLGAAVLRIPILYGEVEKLEESAVTVXFDKVQFSNKSANXDHWQQRFPTHVKDVATVCRQLAEKRXLDPSIKGTFHWSG
Template Known Secondary structure 
TT

S
S
SSGGGSTTGGG

SS

SSBB

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   173......180.........190.........200.........210.........220.........230.........240.........250..
 
   236...240
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Query Sequence  GRHLR
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Template Sequence  NEQXT
Template Known Secondary structure  S

B
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   253....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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