Job Description P0AFS3 Confidence 99.25% Date Thu Jan 5 11:27:08 GMT 2012 Rank 215 Aligned Residues 214 % Identity 13% Template c2uv8C_ PDB info PDB header:transferase Chain: C: PDB Molecule:fatty acid synthase subunit alpha (fas2); PDBTitle: crystal structure of yeast fatty acid synthase with stalled2 acyl carrier protein at 3.1 angstrom resolution Resolution 3.10 Å

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		3	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure													.																				.											.	.	.	.
Query SS confidence													.																				.											.	.	.	.
Query Sequence		K	T	Q	P	L	P	I	L	I	T	G	.	G	G	R	R	I	G	L	A	L	A	W	H	F	I	N	Q	K	Q	P	.	V	I	V	S	Y	R	T	H	Y	P	.	.	.	.	A	I	D	G	L	I	N	A	G	A	Q	C	I	Q	A	D	F	S	T	N	D	G	V	M	A	F	A	D	E	V	L	K	S	T
Query Conservation													.																				.											.	.	.	.
Alig confidence													.																				.											.	.	.	.
Template Conservation
Template Sequence		T	F	K	D	K	Y	V	L	I	T	G	A	G	K	G	S	I	G	A	E	V	L	Q	G	L	L	Q	G	G	A	K	V	V	V	T	T	S	R	F	S	K	Q	V	T	D	Y	Y	Q	S	I	Y	A	K	Y	G	A	K	G	S	T	L	I	V	V	P	F	N	Q	G	S	K	Q	D	V	E	A	L	I	E	F
Template Known Secondary structure				T	T							S			S	S	S												T	T								S	S																			T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		672	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.
		77	.	.	80															.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	G	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	L	H	N	A	S	A	W	M	A	E	K	P	G	A	P	L	A	D	V	L	A	C	M	M	Q	I	H	V	N	T	P	Y	L	L	N	H	A	L	E	R	L	L	R	G	H	G	H	A	A	S	D	I	I	H	F	T	D	Y	V	V
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	Y	D	T	E	K	N	G	G	L	G	W	D	L	D	A	I	I	P	F	A	A	I	P	E	Q	G	I	E	L	E	H	I	D	S	K	S	E	F	A	H	R	I	M	L	T	N	I	L	R	M	M	G	C	V	K	K	Q	K	S	A	R	G	I	E	T	R	P	A	Q	V	I	L	P	M	S	P	N	H	G
Template Known Secondary structure				S		T	T	T	T	S						S												S	B		G	G	G													T																T	T	T			S											S		T	T
Template Predicted Secondary structure
Template SS confidence
		752	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	G	S	D	K	H	I	A	Y	A	A	S	K	A	A	L	D	N	M	T	R	S	F	A	R	K	L	A	P	E	V	K	V	N	S	I	A	P	S	L	I	L	F	N	E	H	D	D	A	E	Y	R	Q	Q	A	L	N	K	S	L	M	K	T	A	P	G	E	K	E	V	I	D	L	V	D	Y	L	L	T
Query Conservation
Alig confidence					.	.																											.	.																											.	.
Template Conservation					.	.																											.	.																											.	.
Template Sequence		T	F	G	.	.	G	D	G	M	Y	S	E	S	K	L	S	L	E	T	L	F	N	R	W	H	S	E	S	W	A	N	.	.	Q	L	T	V	C	G	A	I	I	G	W	T	R	G	T	N	N	I	I	A	E	G	I	E	K	M	.	.	G	V	R	T	F	S	Q	K	E	M	A	F	N	L	L	G	L	L	T
Template Known Secondary structure			S	S	.	.		B	T	T								G	G	G								S	S		T	T	.	.	T																	T	T						T	T	.	.	T		B													G	G	G	S
Template Predicted Secondary structure					.	.																											.	.																											.	.
Template SS confidence
		832	.	.			.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860			.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.			.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions