Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFS3
Confidence100.00%DateThu Jan 5 11:27:08 GMT 2012
Rank140Aligned Residues216
% Identity21%Templatec2hq1A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glucose/ribitol dehydrogenase; PDBTitle: crystal structure of orf 1438 a putative glucose/ribitol2 dehydrogenase from clostridium thermocellum
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  GKTQPLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAIDGLINAGAQCIQADFSTNDGVMAFADEVLKSTHGLRA
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Template Sequence  MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDA
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TTTT
SS
SSTT

TT
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S
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  ILHNASAWMAEKPGAPLADVLACMMQIHVNTPYLLNHALERLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALDN
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Template Sequence  FGRIDILVNNA. . . . . . . . . . . . . . . . . . . . WDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSQANYAASKAGLIG
Template Known Secondary structure  S




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Query Sequence  MTRSFARKLAPE. VKVNSIAPSLILFNEH. . DDAEYRQQALNKSLMKTAPGEKEVIDLVDYLLT. . SCFVTGRSFPLDGG
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Template Sequence  FTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYITGQVINIDGG
Template Known Secondary structure  GGGT
SB

TS
TTSTTSS
B
SGGGTT

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   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   237
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Query Sequence  R
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Template Sequence  L
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   245
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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