Job Description P0AFS3 Confidence 99.35% Date Thu Jan 5 11:27:08 GMT 2012 Rank 209 Aligned Residues 216 % Identity 12% Template c2gn9B_ PDB info PDB header:lyase Chain: B: PDB Molecule:udp-glcnac c6 dehydratase; PDBTitle: crystal structure of udp-glcnac inverting 4,6-dehydratase in complex2 with nadp and udp-glc Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		T	Q	P	L	P	I	L	I	T	G	G	G	R	R	I	G	L	A	L	A	W	H	F	I	N	Q	.	.	K	Q	P	V	I	V	S	Y	R	T	H	Y	P	A	I	D	G	L	I	N	A	G	A	Q	C	I	Q	A	D	F	S	T	N	D	G	V	M	A	F	A	D	E	V	L	K	S	T	H	G	L	R	A
Query Conservation																												.	.
Alig confidence																												.	.
Template Conservation
Template Sequence		L	D	N	Q	T	I	L	I	T	G	G	T	G	S	F	G	K	C	F	V	R	K	V	L	D	T	T	N	A	K	K	I	I	V	Y	S	R	D	E	L	K	Q	S	E	M	A	M	E	F	N	D	P	R	M	R	F	F	I	G	D	V	R	D	L	E	R	L	N	Y	A	L	E	G	V	D	I	C	I	H	A
Template Known Secondary structure			B	S							T	T	T	S														S	B		S							S												S			T	T								T	T									T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	H	N	A	S	A	W	M	A	E	K	P	G	A	P	L	A	D	V	L	A	C	M	M	Q	I	H	V	N	T	P	Y	L	L	N	H	A	L	E	R	L	L	R	G	H	G	H	A	A	S	D	I	I	H	F	T	D	Y	V	V	E	R	G	S	D	K	H	I	A	Y	A	A	S	K	A	A	L	D	N
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	L	K	H	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	E	Y	N	P	L	E	C	I	K	T	N	I	M	G	A	S	N	V	I	N	A	C	L	K	N	A	I	S	Q	V	I	A	L	S	T	D	K	A	A	N	P	I	N	L	Y	G	A	T	K	L	C	S	D	K	L	F	V
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.					S																						T	T		S								G	G	G	S	S			S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.															.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.					200	.	.	.	.	.	.							.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																								.	.	.	.								.	.	.	.	.	.
Query SS confidence																																								.	.	.	.								.	.	.	.	.	.
Query Sequence		M	T	R	S	F	A	R	K	L	A	P	E	V	K	V	N	S	I	A	P	S	L	I	L	F	N	E	H	D	D	A	E	Y	R	Q	Q	A	L	.	.	.	.	N	K	S	L	M	K	T	.	.	.	.	.	.	A	P	G	E	K	E	V	I	D	L	V	D	Y	L	L	T	S	C	F	V	T	G	R	S	F
Query Conservation																																								.	.	.	.								.	.	.	.	.	.
Alig confidence												.	.																											.	.	.	.								.	.	.	.	.	.																				.
Template Conservation												.	.																																																															.
Template Sequence		S	A	N	N	F	K	G	S	S	Q	.	.	T	Q	F	S	V	V	R	Y	G	N	V	V	G	S	R	G	S	V	V	P	F	F	K	K	L	V	Q	N	K	A	S	E	I	P	I	T	D	I	R	M	T	R	F	W	I	T	L	D	E	G	V	S	F	V	L	K	S	L	K	R	M	H	.	G	G	E	I	F
Template Known Secondary structure			G	G	G			S	S	S		.	.												S	S		T	T		S	T	T								T			S					S		S	S																								.	S	S
Template Predicted Secondary structure												.	.																																																															.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230
		232	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	D	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	P	K	I	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions