|   |
134 | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | |
|
|
. | . | . | . | . | . | 160 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | |
. | 180 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | G | L | Y | E | A | V | R | D | G | M | V | V | N | L | L | L | E | A | I | . |
. |
. |
P | D | L | H | L | R | L | D | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | R | A | W | T | P | L | K | G | Q | Q | F | A | K | Y | V | . |
N | P | D | Y | R | D | R | I | A |
Query Conservation |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   | . | . | . |   |
|   |   |
|   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |
| . |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . | . | . |
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|
|
|
|   |
|
|   |
|
|
|   |   |   |
|   |   |   |   |
|   |
|
|
|
|   |
|
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |   |   |
|
|   |   |
| . | . | . |
|
|   |
Template Sequence |   |
P | N | I | Q | T | A | E | E | A | L | D | L | I | V | D | A | I | K | A | A | G | H | D | G | K | V | K | I | G | L | D | C | A | S | S | E | F | F | K | D | G | K | Y | D | L | D | F | K | N | P | N | S | D | K | S | K | W | L | T | G | P | Q | L | A | D | L | Y | H | S | L | M | K | R | Y | . |
. |
. |
P | I | V |
Template Known Secondary structure |   |
|
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| T | T | T |
|  |  |  |  |  |
|
| G | G | G | G |  |  | T | T |  |  |
| T | T | T | T |
| T | T |
|
| G | G | G |
| B |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | . | . | . |
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
216 | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | |
|
|
290 | . | . |
  |
  |   |
188 | . | 190 | . | . | . | . | |
|
. | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | |
. | . | . | . | . | 220 | . | . | . | |
|
. | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
| . |
|
|
|
|  |  |  |  |  | . | . |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | L | E | E | P | C | K | . |
. |
T | R | D | D | S | R | A | F | A | R | E | T | G | I | A | I | A | W | D | E | . |
S | L | R | E | P | D | F | A | F | . |
. |
V | A | E | E | G | V | R | A | V | V | I | K | P | T | L | T | G | S | L | E | K | V | R | E | Q | V | Q | A | A | H | A | L | G | L | T | A | V | I | S |
Query Conservation |   |
  |   |
|   |
|   |   | . | . |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|
| . |
|   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |
|   |
|   |
|
|   |   |   |   |
|
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|
|   |   |
|   |
|
|
|
|
|
|   |   |   |   |   |
|
|   |   |   |
|   |   |   |
|
|
|
Template Sequence |   |
S | I | E | D | P | F | A | E | D | D | W | E | A | W | S | H | F | F | K | T | A | G | I | Q | I | V | A | D | D | L | T | V | T | N | P | K | R | I | A | T | A | I | E | K | K | A | A | D | A | L | L | L | K | V | N | Q | I | G | T | L | S | E | S | I | K | A | A | Q | D | S | F | A | A | G | W | G | V | M | V | S |
Template Known Secondary structure |   |
 |  |  |
|
| S |
| T | T |
|  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  | S | T | T | T | T | T |
|  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
293 | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . |
  |
  |   |
263 | . | . | |
. | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | S | I | . |
E | S | S | L | G | L | T | Q | L | A | R | I | A | A | W | L | T | P | D | T | I | P | G | L | D | T | L | D | L | M | Q |
Query Conservation |   |
  |   |   | . |
|
|   |
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |
Alig confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|   |
|   |   |
|
|
|
|
|
|
|   |   |   |   |   |
|
|   |
|   |   |   |
|   |
|
|   |   |
Template Sequence |   |
H | R | S | G | E | T | E | D | T | F | I | A | D | L | V | V | G | L | R | T | G | Q | I | K | T | G | A | P | A | R | S | E | R | L | A |
Template Known Secondary structure |   |
|
| S | S |
|
| S |
|
|  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |
|
|
| S |
| S |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
373 | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . |
  |