Return to main results Retrieve Phyre Job Id

Job DescriptionP29208
Confidence77.89%DateThu Jan 5 11:45:36 GMT 2012
Rank178Aligned Residues106
% Identity13%Templated1p4ca_
SCOP infoTIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases
Resolution1.35

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   186...190.........200.........210.........220.........230.... .....240.........250.........260.
Predicted Secondary structure 





















....










Query SS confidence 
















































. . . .


























Query Sequence  IAFLEEPCKTRDDSRAFARETGIAIAWDESLREPDFAFVAEEGVRAVVI. . . . KPTLTGSLEKVREQVQAAHALGLTAVI
Query Conservation 
   
 
         
      


 


              
 
 
....
    


  
      
   

   
Alig confidence 
















































....


























Template Conservation       
       
  

     






    

  
  



 
 






 

    
   
 

     
 

 
Template Sequence  MSRQMDASFNWEALRWLRDLWPHKLLVKGLLSAEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKTGKPVLI
Template Known Secondary structure  TSS


TT



S

TT
S

GGGTS
TT


GGGT
S
Template Predicted Secondary structure 


































Template SS confidence 















































































   204.....210.........220.........230.........240.........250.........260.........270.........280...
 
   262.......270.........280.........290......
Predicted Secondary structure 















Query SS confidence 


































Query Sequence  SSSIESSLGLTQLARIAAWLTPDTIPGLDTLDLMQ
Query Conservation 
   

 

  
   


        



     
Alig confidence 


















.....










Template Conservation 




 
 

 







.....

 


  
 
Template Sequence  DSGFRRGSDIVKALALGAE. . . . . AVLLGRATLYG
Template Known Secondary structure 
SS

STT
S.....
S
Template Predicted Secondary structure 







.....
Template SS confidence 


































   284.....290.........300.. .......310...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions