Return to main results Retrieve Phyre Job Id

Job DescriptionP29208
Confidence100.00%DateThu Jan 5 11:45:36 GMT 2012
Rank113Aligned Residues231
% Identity16%Templated1jdfa1
SCOP infoTIM beta/alpha-barrel Enolase C-terminal domain-like D-glucarate dehydratase-like
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   83......90.. .......100........ .110.........120... .. ....130.........140......
Predicted Secondary structure  .









............




..
.






Query SS confidence 









.















. . . . . . . . . . . .














. .

.




















Query Sequence  VAFGVSCALA. ELTDTLPQAANYRAAP. . . . . . . . . . . . LCNGDPDDLILKLAD. . MP. GEKVAKVKVGLYEAVRDGMVV
Query Conservation 
  


 

 .

           
  ............               ..  .
    




      
   
Alig confidence 









.















............














..

.




















Template Conservation 


 
   
           
   
                   

     
       

   


 
      

  
Template Sequence  QRSEVEMLGYLFFVGNRKATPLPYQSQPDDSCDWYRLRHEEAMTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAESI
Template Known Secondary structure 

SB


B

GGGS
S




TT
SSTTS
B
S

S

SSS
Template Predicted Secondary structure 









































Template SS confidence 















































































   141........150.........160.........170.........180.........190.........200.........210.........220
 
   147..150.........160.........170.........180.........190.. .......200.........210.........220..
Predicted Secondary structure 


















..












..
Query SS confidence 













































. .





























. .
Query Sequence  NLLLEAIPDLHLRLDANRAWTPLKGQQFAKYVNPDYRDRIAFLEEP. . CKTRDDSRAFARETGIAIAWDESLREPDFA. .
Query Conservation     
    
  
 



  
    
      
       
   
 
..         
      


 


       ..
Alig confidence 













































..





























..
Template Conservation   




 

  
 



  

   
      

      


             
 
     



 

          
Template Sequence  VALAQRFPQARITLDPNGAWSLNEAIKIGKYLKGSLAYAEDPCGAEQGFSGREVMAEFRRATGLPTATNMIATDWRQMGH
Template Known Secondary structure 
TTS

TTBB
TTTT
S
S
B

BTTB



SSSSSS
Template Predicted Secondary structure 





































Template SS confidence 















































































   221........230.........240.........250.........260.........270.........280.........290.........300
 
   223......230.........240.........250.........260.........270.........280...... ...290... ......300
Predicted Secondary structure 


























.




.


Query SS confidence 































































.






.






Query Sequence  FVAEEGVRAVVIKPTLTGSLEKVREQVQAAHALGLTAVISSSIESSLGLTQLARIAAWLTPDTI. PGLDTLD. LMQAQQV
Query Conservation         
 
 

    


  
      
   

   

   

 

  
   


       . 



  .    
  
Alig confidence 













.
















































.






.






Template Conservation 

   
 


  
 .  



   


  
 
 

    
      
  

 





 
                  
 
Template Sequence  TLSLQSVDIPLADP. HFWTMQGSVRVAQMCHEFGLTWGSHSDNHFDISLAMFTHVAAAAPGKITAIDTHWIWQEGNQRLT
Template Known Secondary structure  T

SB

.
T


B



S

TT

S



B


TTT

SB
Template Predicted Secondary structure 







.


























Template SS confidence 















































































   301........310.... .....320.........330.........340.........350.........360.........370.........
 
   301........310....
Predicted Secondary structure 











Query SS confidence 













Query Sequence  RRWPGSTLPVVEVD
Query Conservation          
     
Alig confidence 













Template Conservation    
     
 
 

Template Sequence  KEPFEIKGGLVQVP
Template Known Secondary structure  SS



BTT

Template Predicted Secondary structure 







Template SS confidence 













   380.........390...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions