Job Description P29208 Confidence 100.00% Date Thu Jan 5 11:45:36 GMT 2012 Rank 84 Aligned Residues 286 % Identity 17% Template c3t9pB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family PDBTitle: crystal structure of a putative mandelate racemase/muconate2 lactonizing enzyme family protein from roseovarius Resolution 1.97 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.																			.
Predicted Secondary structure																		.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	D	R	R	L	K	T	R	D	G	L	Y	V	C	L	.	R	E	G	E	R	E	G	W	G	E	I	S	P	L	P	G	F	S	Q	E	T	W	E	E	A	Q	S	V	L	L	A	W	V	N	N	W	L	A	G	D	C	E	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q
Query Conservation																		.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.
Template Sequence		A	R	L	E	T	F	C	N	E	F	V	G	F	V	R	V	T	T	D	S	G	A	Q	G	W	G	Q	V	S	T	Y	N	A	.	.	.	.	.	.	D	I	T	C	T	I	F	H	R	Q	I	A	P	H	A	L	G	T	D	A	L	D	F	A	D	T	L	D	L	I	Y	E	R	E	L	K	Y	P	G	S	Y
Template Known Secondary structure										S	S									T	T										S	S	S		.	.	.	.	.	.											T					T	T	S	B	T	T													T	T	T			S
Template Predicted Secondary structure																																			.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.							.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.															.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.															.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.															.	.	.	.	.	.
Query Sequence		M	P	S	V	A	F	G	V	S	C	A	L	A	E	L	T	D	T	L	P	Q	A	A	N	Y	R	A	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	C	N	G	D	P	D	D	L	I	L	K	L	A	D	.	.	M	P	G	E	K	V	A	K	V	K	V	G	L	Y	.	.	.	.	.	.
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.															.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.															.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	R	A	M	T	G	L	D	T	A	L	W	D	M	R	G	K	L	E	G	K	P	V	A	T	L	L	G	G	S	P	G	P	V	R	A	Y	A	S	S	M	R	R	D	I	T	P	E	D	E	A	E	R	F	C	R	L	R	D	D	K	G	F	T	A	F	K	W	R	V	G	A	E	A	G	R	D	H	D
Template Known Secondary structure																						T		B					T	T			S												S	S	S																										S		T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
			138	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure		.															.																																												.	.
Query SS confidence		.															.																																												.	.
Query Sequence		.	E	A	V	R	D	G	M	V	V	N	L	L	L	E	.	A	I	P	D	L	H	L	R	L	D	A	N	R	A	W	T	P	L	K	G	Q	Q	F	A	K	Y	V	N	P	D	Y	R	D	R	I	A	F	L	E	E	P	C	K	.	.	T	R	D	D	S	R	A	F	A	R	E	T	G	I	A	I	A	W	D
Query Conservation		.															.																																												.	.
Alig confidence		.															.																															.	.	.											.	.
Template Conservation																																																.	.	.
Template Sequence		E	W	P	G	R	T	E	A	V	V	P	T	V	S	R	A	L	G	D	G	I	E	K	L	V	D	G	N	S	C	Y	S	P	A	R	A	I	E	V	G	K	L	L	Q	D	N	.	.	.	G	I	G	H	F	E	E	P	C	P	Y	W	E	Y	D	Q	T	A	A	V	R	A	A	L	L	L	D	V	A	G	G
Template Known Secondary structure		S	S	T	T															T	T								T	T																	T	.	.	.	T								S		T	T													S	S
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.				.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		214	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure											.	.																																																																		.	.	.	.
Query SS confidence											.	.																																																																		.	.	.	.
Query Sequence		E	S	L	R	E	P	D	F	A	.	.	F	V	A	E	E	G	V	R	A	V	V	I	K	P	T	L	T	G	S	L	E	K	V	R	E	Q	V	Q	A	A	H	A	L	G	L	T	A	V	I	S	S	S	I	E	S	S	L	G	L	T	Q	L	A	R	I	A	A	W	L	T	P	D	T	I	P	.	.	.	.
Query Conservation											.	.																																																																		.	.	.	.
Alig confidence											.	.																																											.																							.	.	.	.
Template Conservation																																																							.
Template Sequence		E	Q	D	C	E	Y	S	S	W	Q	L	M	L	D	R	G	A	V	D	I	V	Q	P	D	V	M	Y	M	G	G	M	H	R	T	L	Q	V	C	Q	M	A	A	R	A	G	L	P	V	T	P	H	A	A	.	N	L	S	L	V	T	M	C	T	M	H	L	L	R	A	I	P	N	A	G	K	Y	L	E	F	S
Template Known Secondary structure		T	T			S										T	T			S										T	S														T	T			B						.	S	S	S											T	T		T	T	B		S
Template Predicted Secondary structure																																																							.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
				288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	G	L	D	T	L	D	L	M	Q	A	Q	Q	V	R	R	W	P	G	S	T	L	P	V	V	E	V	D
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		I	E	G	P	E	Y	Y	P	W	Q	E	G	L	F	L	G	D	P	Y	R	I	E	G	G	Q	A	I	V	T
Template Known Secondary structure					T	T	T		G	G	G	T	T	S	B	S	S		T	T			B	T	T
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions