Job Description P29208 Confidence 100.00% Date Thu Jan 5 11:45:36 GMT 2012 Rank 76 Aligned Residues 289 % Identity 15% Template c3rr1B_ PDB info PDB header:lyase Chain: B: PDB Molecule:putative d-galactonate dehydratase; PDBTitle: crystal structure of enolase prk14017 (target efi-500653) from2 ralstonia pickettii 12j Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																				.																																											.	.	.
Query SS confidence																																				.																																											.	.	.
Query Sequence		M	R	S	A	Q	V	Y	R	W	Q	I	P	M	D	A	G	V	V	L	R	D	R	R	L	K	T	R	D	G	L	Y	V	C	L	.	R	E	G	E	R	E	G	W	G	E	I	S	P	L	P	G	F	S	Q	E	T	W	E	E	A	Q	S	V	L	L	A	W	V	N	N	W	L	A	G	D	C	E	.	.	.
Query Conservation																																				.																																											.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.																.	.	.	.	.																							.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Sequence		I	T	R	L	T	T	Y	R	L	P	P	R	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	F	L	K	V	E	T	D	E	G	V	T	G	W	G	E	P	V	I	E	G	.	.	.	.	.	R	A	R	T	V	E	A	A	V	H	E	L	S	D	Y	L	I	G	Q	D	P	S	R	I	N
Template Known Secondary structure											T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	S										T	T	.	.	.	.	.													G	G	G	T	T	T	S		T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.																	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.						.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
																77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.													.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	Q	M	P	S	V	A	F	G	V	S	C	A	L	A	E	L	T	D	T	L	P	Q	A	A	N	Y	R	A	A	P	.	.	.	.	.	.	.	.	.	.	.	.	L	C	N	G	D	P	D	D	L	I	L	K	L	A	D	.	.	M	P	G	E	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation
Template Sequence		D	L	W	Q	T	M	Y	R	A	G	F	Y	R	G	G	P	I	L	M	S	A	I	A	G	I	D	Q	A	L	W	D	I	K	G	K	V	L	G	V	P	V	Y	E	L	L	G	G	L	V	R	D	K	M	R	T	Y	S	W	V	G	G	D	R	P	A	D	V	I	A	G	M	K	A	L	Q	A	G	G	F	D
Template Known Secondary structure										S	S	S																											T	S	B					T	T			S		S											S	S													T	T	T
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		129	130	.	.	.	.	.	.	.									.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.															.																																												.	.
Query SS confidence											.	.	.	.	.	.	.	.															.																																												.	.
Query Sequence		V	A	K	V	K	V	G	L	Y	.	.	.	.	.	.	.	.	E	A	V	R	D	G	M	V	V	N	L	L	L	E	.	A	I	P	D	L	H	L	R	L	D	A	N	R	A	W	T	P	L	K	G	Q	Q	F	A	K	Y	V	N	P	D	Y	R	D	R	I	A	F	L	E	E	P	C	K	.	.	T	R	D
Query Conservation											.	.	.	.	.	.	.	.															.																																												.	.
Alig confidence											.	.	.	.	.	.	.	.															.																															.	.	.											.	.
Template Conservation																																																																.	.	.
Template Sequence		H	F	K	L	N	G	C	E	E	M	G	I	I	D	T	S	R	A	V	D	A	A	V	A	R	V	A	E	I	R	S	A	F	G	N	T	V	E	F	G	L	D	F	H	G	R	V	S	A	P	M	A	K	V	L	I	K	E	L	E	P	Y	.	.	.	R	P	L	F	I	E	E	P	V	L	A	E	Q	A	E
Template Known Secondary structure							S	S	S	S	S	S		B		S																	T	T	G	G	G	S							T	T		B													G	G	G	.	.	.			S						S				S	S	S
Template Predicted Secondary structure																																																																.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.				.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		D	S	R	A	F	A	R	E	T	G	I	A	I	A	W	D	E	S	L	R	E	P	D	F	A	F	V	A	.	.	E	E	G	V	R	A	V	V	I	K	P	T	L	T	G	S	L	E	K	V	R	E	Q	V	Q	A	A	H	A	L	G	L	T	A	V	I	S	S	S	I	E	S	S	L	G	L	T	Q	L	A
Query Conservation																														.	.
Alig confidence																														.	.																																								.
Template Conservation																																																																							.
Template Sequence		T	Y	A	R	L	A	A	H	T	H	L	P	I	A	A	G	E	R	M	F	S	R	F	D	F	K	R	V	L	E	A	G	G	V	S	I	L	Q	P	D	L	S	H	A	G	G	I	T	E	C	V	K	I	A	A	M	A	E	A	Y	D	V	A	L	A	P	H	C	P	.	L	G	P	I	A	L	A	A	C	L
Template Known Secondary structure								T	T		S	S						T	T			S														S					B	T	T	T	T	T														T	T	T						B			.	S
Template Predicted Secondary structure																																																																							.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		R	I	A	A	W	L	T	P	D	T	I	P	G	L	.	D	T	L	D	L	M	Q	A	Q	Q	V	R	R	W	P	G	S	T	L	P	V	V	E	V	D
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence		H	V	D	F	V	S	W	N	A	T	L	Q	E	Q	S	M	G	A	E	L	L	D	Y	V	R	N	K	A	D	F	A	L	E	G	G	Y	I	R	P	P
Template Known Secondary structure								T	T	B						S					S	G	G	G	B	S		G	G	G	G				T	T
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions