Job Description P29208 Confidence 100.00% Date Thu Jan 5 11:45:36 GMT 2012 Rank 61 Aligned Residues 303 % Identity 13% Template c3rcyC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:mandelate racemase/muconate lactonizing enzyme-like PDBTitle: crystal structure of mandelate racemase/muconate lactonizing enzyme-2 like protein from roseovarius sp. tm1035 Resolution 1.99 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	V	Y	R	W	Q	I	P	M	D	A	G	V	V	L	R	D	R	R	L	K	T	R	D	G	L	Y	V	C	L	.	R	E	G	E	R	E	G	W	G	E	I	S	P	L	P	G	F	S	Q	E	T	W	E	E	A	Q	S	V	L	L	A	W	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.									.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.
Template Sequence		V	K	L	R	D	L	D	I	I	V	T	A	P	P	A	P	G	W	G	G	.	.	.	R	Y	W	I	L	V	K	L	T	T	D	D	G	I	T	G	W	G	E	C	Y	A	A	S	V	G	P	E	A	M	R	A	V	I	E	D	V	F	A	R	H	M	E	G	E	N	P	E	N	I	E	L	M	F	R	R	V
Template Known Secondary structure																T	T		T	T		.	.	.	S										T	T												S	S																	T	T	T	S		T	T
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20				.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.																							.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query Sequence		N	N	W	L	A	G	D	C	E	L	P	Q	M	P	S	V	A	F	G	V	S	C	A	L	A	E	L	T	D	T	L	P	Q	A	A	N	Y	R	A	A	P	L	C	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	P	D	D	L	I	L	K	L	A	D	.	.
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation
Template Sequence		Y	S	S	G	F	T	Q	R	P	D	L	T	A	I	G	A	F	S	G	L	E	I	A	C	W	D	I	L	G	K	A	R	G	R	P	V	W	A	L	L	G	G	K	M	N	P	R	I	R	A	Y	T	Y	L	Y	P	L	P	H	H	P	I	T	P	F	W	T	S	A	D	M	A	A	E	S	A	A	D	C	V
Template Known Secondary structure				T	T	T			S																									T	S	B	G	G	G	G	T	T			S		S	S											T	T	S						T	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.													.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.															.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.															.
Query Sequence		M	P	G	E	K	V	A	K	V	K	V	G	L	Y	.	.	.	.	.	.	.	.	.	.	.	.	E	A	V	R	D	G	M	V	V	N	L	L	L	E	.	A	I	P	D	L	H	L	R	L	D	A	N	R	A	W	T	P	L	K	G	Q	Q	F	A	K	Y	V	N	P	D	Y	R	D	R	I	A	F	L	E
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.															.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.															.																															.	.	.
Template Conservation																																																																									.	.	.
Template Sequence		A	R	G	Y	T	A	V	K	F	D	P	A	G	P	Y	T	L	R	G	G	H	M	P	A	M	T	D	I	S	L	S	V	E	F	C	R	K	I	R	A	A	V	G	D	K	A	D	L	L	F	G	T	H	G	Q	F	T	T	A	G	A	I	R	L	G	Q	A	I	E	P	Y	.	.	.	S	P	L	W	Y	E
Template Known Secondary structure			T	T		S							S				B	T	T			B																						T	T	S	S								S		B													G	G	G	.	.	.			S
Template Predicted Secondary structure																																																																									.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.				.	230	.	.	.	.
		191	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure						.	.																														.	.
Query SS confidence						.	.																														.	.
Query Sequence		E	P	C	K	.	.	T	R	D	D	S	R	A	F	A	R	E	T	G	I	A	I	A	W	D	E	S	L	R	E	P	D	F	A	F	.	.	V	A	E	E	G	V	R	A	V	V	I	K	P	T	L	T	G	S	L	E	K	V	R	E	Q	V	Q	A	A	H	A	L	G	L	T	A	V	I	S	S	S	I	E
Query Conservation						.	.																														.	.
Alig confidence						.	.																														.	.																																				.
Template Conservation																																																																										.
Template Sequence		E	P	V	P	P	D	N	V	G	A	M	A	Q	V	A	R	A	V	R	I	P	V	A	T	G	E	R	L	T	T	K	A	E	F	A	P	V	L	R	E	G	A	A	A	I	L	Q	P	A	L	G	R	A	G	G	I	W	E	M	K	K	V	A	A	M	A	E	V	Y	N	A	Q	.	M	A	P	H	L	Y	A
Template Known Secondary structure				S		T	T												S	S	S						T	T			S										T	T			S										T														T	T	T			.						S	S
Template Predicted Secondary structure																																																																										.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	L	G	L	T	Q	L	A	R	I	A	A	W	L	T	P	D	T	I	P	G	L	D	T	L	D	L	M	Q	A	Q	Q	V	R	R	W	P	G	S	T	L	P	V	V	E	V	D
Query Conservation
Alig confidence																								.
Template Conservation																								.
Template Sequence		G	P	V	E	W	A	A	N	V	H	F	A	A	S	I	P	N	I	L	M	C	E	.	S	I	E	T	P	F	H	D	A	L	I	K	G	S	I	R	V	E	G	G	Y	I	T	P	P
Template Known Secondary structure															T		T	T	B					.											T	T	T	S	S				T	T
Template Predicted Secondary structure																								.
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions